Gene
RNA
| Item | Value |
|---|---|
| gene id | G1698157 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048584.1 |
| NCBI id | CM023238.2 |
| chromosome length | 46616863 |
| location | 45140292 ~ 45140529 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| proline-rich protein 2-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1942949 | True | 238 | lncRNA | 0.44 | 1 | 45140292 | 45140529 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110499568 | LOC106589976 | coding | upstream | 217595 | 44885773 ~ 44922697 (+) |
| LOC110499508 | LOC106589972 | coding | upstream | 602574 | 44402023 ~ 44537718 (+) |
| LOC110499511 | LOC106578785 | coding | upstream | 778318 | 44337645 ~ 44361974 (+) |
| LOC110499510 | LOC106589963 | coding | upstream | 813043 | 44298168 ~ 44327249 (+) |
| LOC110499566 | LOC105028001 | coding | upstream | 876875 | 44181988 ~ 44263417 (+) |
| LOC110515455 | jag1 | coding | downstream | 184372 | 45324901 ~ 45444013 (+) |
| LOC118942022 | NA | coding | downstream | 538396 | 45678925 ~ 45679902 (+) |
| LOC118942078 | NA | coding | downstream | 882365 | 46022894 ~ 46025800 (+) |
| tsnax | tsnax | coding | downstream | 1017105 | 46157634 ~ 46174248 (+) |
| disc1 | LOC106595121 | coding | downstream | 1038072 | 46178601 ~ 46308949 (+) |
| G1698148 | NA | non-coding | upstream | 6794 | 45133298 ~ 45133498 (+) |
| G1698133 | NA | non-coding | upstream | 16037 | 45123928 ~ 45124255 (+) |
| G1698124 | NA | non-coding | upstream | 23732 | 45115946 ~ 45116560 (+) |
| G1698099 | NA | non-coding | upstream | 43470 | 45096257 ~ 45096822 (+) |
| G1698092 | NA | non-coding | upstream | 52381 | 45087324 ~ 45087911 (+) |
| G1698158 | NA | non-coding | downstream | 402 | 45140931 ~ 45141152 (+) |
| G1698159 | NA | non-coding | downstream | 651 | 45141180 ~ 45141400 (+) |
| G1698162 | NA | non-coding | downstream | 25505 | 45166034 ~ 45166382 (+) |
| G1698164 | NA | non-coding | downstream | 42962 | 45183491 ~ 45184074 (+) |
| G1698179 | NA | non-coding | downstream | 109266 | 45249795 ~ 45250005 (+) |
| G1698119 | yo84 | other | upstream | 27931 | 45111566 ~ 45112361 (+) |
| G1697374 | NA | other | upstream | 640446 | 44498660 ~ 44499846 (+) |
| G1697222 | NA | other | upstream | 908525 | 44231322 ~ 44231767 (+) |
| G1697152 | NA | other | upstream | 1235434 | 43867229 ~ 43908497 (+) |
| G1698413 | i2b2b | other | downstream | 555667 | 45696196 ~ 45697330 (+) |
| G1698414 | NA | other | downstream | 559561 | 45700090 ~ 45701101 (+) |
| G1698884 | NA | other | downstream | 1048416 | 46188945 ~ 46190421 (+) |
| LOC110499521 | msmb | other | downstream | 1406243 | 46546637 ~ 46552961 (+) |
| LOC118942483 | NA | other | downstream | 1441341 | 46580927 ~ 46588053 (+) |
