G1698425


Basic Information

Item Value
gene id G1698425
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 45804677 ~ 45804961 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1943300
gtgtagtgggtgagaagtcaggcgcaggaagcagagagttcagggtagtgctacTTTAATGCACAaaacggcgaacataagccaaccccacgaaaacacagggcgtataacaaaacaaacgccccaaacacggggacttaaactgtccagcaaaacccacgaaatgggaaaACACGTAAcccacagacgtgcacacaagttacacaaaacagaaggtcacaataatgaatcccgcacaaagaaccaggcgggccggctgactaataaagcctcactaattatacc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1943300 True 285 lncRNA 0.48 1 45804677 45804961

Neighbor

gene id symbol gene type direction distance location
LOC118942022 NA coding upstream 124775 45678925 ~ 45679902 (+)
LOC110515455 jag1 coding upstream 360664 45324901 ~ 45444013 (+)
LOC110499568 LOC106589976 coding upstream 881980 44885773 ~ 44922697 (+)
LOC110499508 LOC106589972 coding upstream 1266959 44402023 ~ 44537718 (+)
LOC110499511 LOC106578785 coding upstream 1442703 44337645 ~ 44361974 (+)
LOC118942078 NA coding downstream 217933 46022894 ~ 46025800 (+)
tsnax tsnax coding downstream 352673 46157634 ~ 46174248 (+)
disc1 LOC106595121 coding downstream 373640 46178601 ~ 46308949 (+)
LOC110499530 LOC106590013 coding downstream 607551 46412512 ~ 46501346 (+)
LOC110499521 msmb coding downstream 741676 46546637 ~ 46552961 (+)
G1698424 NA non-coding upstream 1407 45802958 ~ 45803270 (+)
G1698421 NA non-coding upstream 10014 45794426 ~ 45794663 (+)
G1698418 NA non-coding upstream 97950 45706522 ~ 45706727 (+)
G1698386 NA non-coding upstream 191623 45612490 ~ 45613054 (+)
G1698385 NA non-coding upstream 193816 45610209 ~ 45610861 (+)
G1698429 NA non-coding downstream 5628 45810589 ~ 45810916 (+)
G1698431 NA non-coding downstream 7814 45812775 ~ 45815373 (+)
G1698453 NA non-coding downstream 59537 45864498 ~ 45871292 (+)
G1698465 NA non-coding downstream 81838 45886799 ~ 45887541 (+)
G1698472 NA non-coding downstream 91786 45896747 ~ 45897331 (+)
G1698414 NA other upstream 103576 45700090 ~ 45701101 (+)
G1698413 i2b2b other upstream 107347 45696196 ~ 45697330 (+)
G1698119 yo84 other upstream 692316 45111566 ~ 45112361 (+)
G1697374 NA other upstream 1304831 44498660 ~ 44499846 (+)
G1698884 NA other downstream 383984 46188945 ~ 46190421 (+)
LOC118942483 NA other downstream 776909 46580927 ~ 46588053 (+)

Expression


Co-expression Network