G1698822



Basic Information


Item Value
gene id G1698822
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 46054305 ~ 46054504 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1943779
CAAGTAGATTGTGCTTATTTATTGGCACATTGAACCACATTGCGTGCTGTAGTTAAACAACTCAGTGGATAGTGCTAAAACGATACCATTTCTGAATTCTGCCATCTTTATGTACATTTTCCATTAAGCATTTTTTGCGTTCACCCCCCccagatttttatttggatttcatgtaatggacatacacaaaatagtccaaa

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1943779 True 200 lncRNA 0.36 1 46054305 46054504

Neighbor


gene id symbol gene type direction distance location
LOC118942078 NA coding upstream 28505 46022894 ~ 46025800 (+)
LOC118942022 NA coding upstream 374403 45678925 ~ 45679902 (+)
LOC110515455 jag1 coding upstream 610292 45324901 ~ 45444013 (+)
LOC110499568 LOC106589976 coding upstream 1131608 44885773 ~ 44922697 (+)
LOC110499508 LOC106589972 coding upstream 1516587 44402023 ~ 44537718 (+)
tsnax tsnax coding downstream 103130 46157634 ~ 46174248 (+)
disc1 LOC106595121 coding downstream 124097 46178601 ~ 46308949 (+)
LOC110499530 LOC106590013 coding downstream 358008 46412512 ~ 46501346 (+)
LOC110499521 msmb coding downstream 492133 46546637 ~ 46552961 (+)
mrpl2 rl2 coding downstream 508540 46563044 ~ 46577877 (+)
G1698811 NA non-coding upstream 7669 46046048 ~ 46046636 (+)
G1698808 NA non-coding upstream 8326 46036070 ~ 46045979 (+)
G1698807 NA non-coding upstream 16805 46029300 ~ 46037500 (+)
G1698805 NA non-coding upstream 25517 46024136 ~ 46028788 (+)
G1698806 NA non-coding upstream 26396 46026148 ~ 46027909 (+)
G1698824 NA non-coding downstream 2352 46056856 ~ 46058450 (+)
G1698830 NA non-coding downstream 9950 46064454 ~ 46064686 (+)
G1698836 NA non-coding downstream 15181 46069685 ~ 46069932 (+)
G1698841 NA non-coding downstream 28073 46082577 ~ 46087830 (+)
G1698845 NA non-coding downstream 39737 46094241 ~ 46094447 (+)
G1698414 NA other upstream 353204 45700090 ~ 45701101 (+)
G1698413 i2b2b other upstream 356975 45696196 ~ 45697330 (+)
G1698119 yo84 other upstream 941944 45111566 ~ 45112361 (+)
G1697374 NA other upstream 1554459 44498660 ~ 44499846 (+)
G1698884 NA other downstream 134441 46188945 ~ 46190421 (+)
LOC118942483 NA other downstream 527366 46580927 ~ 46588053 (+)

Expression



Co-expression Network