Gene
RNA
| Item | Value |
|---|---|
| gene id | G1698925 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048584.1 |
| NCBI id | CM023238.2 |
| chromosome length | 46616863 |
| location | 46337343 ~ 46342460 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1943913 | False | 232 | lncRNA | 0.51 | 2 | 46337343 | 46342460 |
| TU1943914 | True | 232 | lncRNA | 0.51 | 2 | 46340121 | 46342460 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| disc1 | LOC106595121 | coding | upstream | 28394 | 46178601 ~ 46308949 (+) |
| tsnax | tsnax | coding | upstream | 163095 | 46157634 ~ 46174248 (+) |
| LOC118942078 | NA | coding | upstream | 311543 | 46022894 ~ 46025800 (+) |
| LOC118942022 | NA | coding | upstream | 657441 | 45678925 ~ 45679902 (+) |
| LOC110515455 | jag1 | coding | upstream | 893330 | 45324901 ~ 45444013 (+) |
| LOC110499530 | LOC106590013 | coding | downstream | 70052 | 46412512 ~ 46501346 (+) |
| LOC110499521 | msmb | coding | downstream | 204177 | 46546637 ~ 46552961 (+) |
| mrpl2 | rl2 | coding | downstream | 220584 | 46563044 ~ 46577877 (+) |
| LOC118942483 | NA | coding | downstream | 238467 | 46580927 ~ 46588053 (+) |
| G1698919 | NA | non-coding | upstream | 1565 | 46321258 ~ 46335778 (+) |
| G1698909 | NA | non-coding | upstream | 44675 | 46283033 ~ 46292668 (+) |
| G1698905 | NA | non-coding | upstream | 88353 | 46246178 ~ 46248990 (+) |
| G1698893 | NA | non-coding | upstream | 110619 | 46221187 ~ 46226724 (+) |
| G1698892 | NA | non-coding | upstream | 118625 | 46218050 ~ 46218718 (+) |
| G1698931 | NA | non-coding | downstream | 25359 | 46367819 ~ 46450991 (+) |
| G1698935 | NA | non-coding | downstream | 37336 | 46379796 ~ 46380972 (+) |
| G1698960 | NA | non-coding | downstream | 88192 | 46430652 ~ 46440654 (+) |
| G1699000 | LOC106590727 | non-coding | downstream | 182162 | 46524622 ~ 46526558 (+) |
| G1698884 | NA | other | upstream | 146922 | 46188945 ~ 46190421 (+) |
| G1698414 | NA | other | upstream | 636242 | 45700090 ~ 45701101 (+) |
| G1698413 | i2b2b | other | upstream | 640013 | 45696196 ~ 45697330 (+) |
| G1698119 | yo84 | other | upstream | 1224982 | 45111566 ~ 45112361 (+) |
| LOC110499568 | LOC106589976 | other | upstream | 1418011 | 44885773 ~ 44922697 (+) |
