G1698935


Basic Information

Item Value
gene id G1698935
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 46379796 ~ 46380972 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1943925
CTGATGGTACATACAGCATTGAAACATTACCATACAGCGATTCACTGTAGTTTAATATACATGGtaatcagtggcgattttagaaTGTAAATCTTGGTAGGGCAAACTCCCAAAAAAttgttttagatgcatgccagcaaagccactacacaacacaacactaaacaatgcattaattacactataacggtgacaaacagtgcccacaaactgttagggcctacatggagctgttagggcctacataaagctgttagggcctacgtaGAGCTGTTAGGGCcgacataaagctgtcagggtcTACGTagagctgttagggcctacataaagctgttagggacTACATAGAGCTATTTGGGACTAGGTagagctgttagggcctacataaagctgttagggacTACGTAGAGCTGTTAGGGACTACGTAGAGCTGTTGGGGACTACGTAGAGCTGTTGGGGACTACGTAGAGCTGTTGGGGACTACGTAGAGCTGTTGGGGACTACCTTGTAGCTGTTAGggactacataaagctgttagggcctacataaagctgttagggtctacataaagctgttagggcctacataaagctgttagggactacataaagctgttagggacTACATagagctgtcagggcctacataaagctgtcagggcctacacaATGCTGTTAGGGACTACGTagagctgttagggcctacataaagctgtcccaagaGGCTTTGGAACATTACCAGAGATTCAACATAATTCTTCGACATTTGCACTTCAAGTGGCCTTAAATTAAAACGGATTCTCtaaataaaaaaagaagaagatatATTATGCATCTCCACAATGTCCAGGAAGTTCTTAATCATACAGTCAAATATATACAAACTGTATGTTAAAATAACTGTGTGTGAGTCCCTGACTGACAGGCAAAGAAGCTATGAATGGGTCAGaggttcaccaatcagggccttgataGGGCCTGGGGGGGGGCATTTCTTTGGGAACAACGGGGGGGGGGACATTGCTTTGGGAAcggcgg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1943925 True 1037 lncRNA 0.44 2 46379796 46380972

Neighbor

gene id symbol gene type direction distance location
disc1 LOC106595121 coding upstream 70847 46178601 ~ 46308949 (+)
tsnax tsnax coding upstream 205548 46157634 ~ 46174248 (+)
LOC118942078 NA coding upstream 353996 46022894 ~ 46025800 (+)
LOC118942022 NA coding upstream 699894 45678925 ~ 45679902 (+)
LOC110515455 jag1 coding upstream 935783 45324901 ~ 45444013 (+)
LOC110499530 LOC106590013 coding downstream 31540 46412512 ~ 46501346 (+)
LOC110499521 msmb coding downstream 165665 46546637 ~ 46552961 (+)
mrpl2 rl2 coding downstream 182072 46563044 ~ 46577877 (+)
LOC118942483 NA coding downstream 199955 46580927 ~ 46588053 (+)
G1698921 NA non-coding upstream 13398 46326062 ~ 46366398 (+)
G1698925 NA non-coding upstream 37336 46337343 ~ 46342460 (+)
G1698919 NA non-coding upstream 44018 46321258 ~ 46335778 (+)
G1698909 NA non-coding upstream 87128 46283033 ~ 46292668 (+)
G1698905 NA non-coding upstream 130806 46246178 ~ 46248990 (+)
G1698960 NA non-coding downstream 49680 46430652 ~ 46440654 (+)
G1699000 LOC106590727 non-coding downstream 143650 46524622 ~ 46526558 (+)
G1699002 NA non-coding downstream 154150 46535122 ~ 46535946 (+)
G1699003 NA non-coding downstream 155430 46536402 ~ 46537065 (+)
G1698884 NA other upstream 189375 46188945 ~ 46190421 (+)
G1698414 NA other upstream 678695 45700090 ~ 45701101 (+)
G1698413 i2b2b other upstream 682466 45696196 ~ 45697330 (+)
G1698119 yo84 other upstream 1267435 45111566 ~ 45112361 (+)
LOC110499568 LOC106589976 other upstream 1460464 44885773 ~ 44922697 (+)

Expression


Co-expression Network