G1699002


Basic Information

Item Value
gene id G1699002
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 46535122 ~ 46535946 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1944003
TCTTGGGCCCGTGGTTCTGTTCCACCAGATAGGCATCAATCAGGGCCATACTGCTCATGATCAGCAGGGTGGACAGGCAGATATGGGGCTGGTTGGTGGGAGGAGGGGGCACCATCATGACTGGGGCAGGAGGAGGTCTGTTAGGGAGAGTGTAGGGTGGTCCTCTGCTAAATAAAGGCAGGTTAGACTGTTACAGTAGACGGtaatgcctagttaaataaataaaacaaatgttccACTCCATGGCTGGGGTTTtcacagggggagggaggaggggttaggagaagatttgtggaggagggagggattaGGAGAtttgtggaggaggaggagggagggggtaggaggagatttgtggaggagggagggattaGGAGAtttgtggaggaggaggagggaggtggaaggAGGGGGTAGGAGGAGATTTGTGGCTGTTACTGTTAGAGAGTGTTACTCCCTTCCCTGTTTTAGCTGTTACTGTTAGAGAGTGTTACTCCCTCCCATGTGATTGATGTTACTGTTAGAGAGTGTTACTCCCTCCCCTGTGTTGGCTGTTACTGTTAGAGTGTGGTGCTCCCCCTCTCTTGGTCAACAGCCAGGTTACTAATAGGATTTCCACAGATCAATCAATCCTGGGCGAGAGGCTGAAGCAGAGACATCTCTGAGCCAG

Function

NR:

description
PREDICTED: transmembrane protein 121-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1944003 True 670 lncRNA 0.52 2 46535122 46535946

Neighbor

gene id symbol gene type direction distance location
LOC110499530 LOC106590013 coding upstream 39624 46412512 ~ 46501346 (+)
disc1 LOC106595121 coding upstream 226173 46178601 ~ 46308949 (+)
tsnax tsnax coding upstream 360874 46157634 ~ 46174248 (+)
LOC118942078 NA coding upstream 509322 46022894 ~ 46025800 (+)
LOC118942022 NA coding upstream 855220 45678925 ~ 45679902 (+)
LOC110499521 msmb coding downstream 10691 46546637 ~ 46552961 (+)
mrpl2 rl2 coding downstream 27098 46563044 ~ 46577877 (+)
LOC118942483 NA coding downstream 44981 46580927 ~ 46588053 (+)
G1699000 LOC106590727 non-coding upstream 8564 46524622 ~ 46526558 (+)
G1698931 NA non-coding upstream 84131 46367819 ~ 46450991 (+)
G1698960 NA non-coding upstream 94468 46430652 ~ 46440654 (+)
G1698935 NA non-coding upstream 154150 46379796 ~ 46380972 (+)
G1699003 NA non-coding downstream 456 46536402 ~ 46537065 (+)
G1699023 NA non-coding downstream 55293 46591239 ~ 46591559 (+)
G1699024 NA non-coding downstream 56013 46591959 ~ 46592171 (+)
G1698884 NA other upstream 344701 46188945 ~ 46190421 (+)
G1698414 NA other upstream 834021 45700090 ~ 45701101 (+)
G1698413 i2b2b other upstream 837792 45696196 ~ 45697330 (+)
G1698119 yo84 other upstream 1422761 45111566 ~ 45112361 (+)
LOC110499568 LOC106589976 other upstream 1615790 44885773 ~ 44922697 (+)

Expression


Co-expression Network