Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC118943024 |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 1484027 ~ 1484168 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_005038760.1 | True | 142 | mRNA | 0.44 | 1 | 1484027 | 1484168 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110518351 | LOC103459268 | coding | upstream | 178124 | 1156714 ~ 1305903 (+) |
| LOC118942824 | LOC106609805 | coding | upstream | 484463 | 853031 ~ 999564 (+) |
| LOC118936449 | LOC106575063 | coding | upstream | 774027 | 647909 ~ 710000 (+) |
| LOC101268929 | LOC101268929 | coding | upstream | 917705 | 479755 ~ 566322 (+) |
| LOC118942821 | wnt5b | coding | upstream | 1019453 | 225129 ~ 464574 (+) |
| LOC110499710 | LOC106596118 | coding | downstream | 5525 | 1489693 ~ 1500056 (+) |
| LOC110517600 | rab3ip | coding | downstream | 33194 | 1517362 ~ 1600082 (+) |
| LOC110500915 | LOC106576535 | coding | downstream | 123246 | 1607414 ~ 1669220 (+) |
| LOC118942986 | NA | coding | downstream | 186891 | 1671059 ~ 1673293 (+) |
| LOC110499743 | cnot2 | coding | downstream | 204774 | 1688942 ~ 1769720 (+) |
| G1699777 | NA | non-coding | upstream | 10064 | 1473236 ~ 1473963 (+) |
| G1699773 | NA | non-coding | upstream | 32666 | 1450479 ~ 1451361 (+) |
| G1699761 | NA | non-coding | upstream | 55835 | 1427168 ~ 1428192 (+) |
| G1699744 | NA | non-coding | upstream | 97836 | 1385186 ~ 1386191 (+) |
| G1699736 | NA | non-coding | upstream | 118406 | 1364978 ~ 1365621 (+) |
| G1699800 | NA | non-coding | downstream | 48471 | 1532639 ~ 1534218 (+) |
| G1699812 | NA | non-coding | downstream | 75964 | 1560132 ~ 1562192 (+) |
| G1699819 | NA | non-coding | downstream | 87463 | 1571631 ~ 1572818 (+) |
| G1699826 | NA | non-coding | downstream | 108222 | 1592390 ~ 1592616 (+) |
| G1699827 | NA | non-coding | downstream | 108961 | 1593129 ~ 1593328 (+) |
| G1699724 | LOC106592130 | other | upstream | 140889 | 1342499 ~ 1343138 (+) |
| G1699655 | NA | other | upstream | 383806 | 1094149 ~ 1100221 (+) |
| G1699629 | NA | other | upstream | 398001 | 1082691 ~ 1086026 (+) |
| LOC118942820 | LOC108442871 | other | upstream | 1342778 | 60262 ~ 194218 (+) |
| G1699804 | NA | other | downstream | 53788 | 1537956 ~ 1538880 (+) |
| G1699934 | NA | other | downstream | 383526 | 1867694 ~ 1869554 (+) |
| LOC110519348 | tbc1d15 | other | downstream | 1155172 | 2588642 ~ 2667278 (+) |
