LOC118942986


Basic Information

Item Value
gene id LOC118942986
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 1671059 ~ 1673293 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036958448.1
ATGACCCCACCGTCACAGGACCCCACCGTCACAGGACCCCACAGGACCCCACCGTCACAGGACCCCACCGTCACAGGACCCCACCGTCACAGGACCCCACAGGACCCCACCGTCACAGGACCCCACCGTCACAGGACCCCACCGTCACAGGACCCCACAGGACCACACCGTCACAGGACCACACCGTCACAGGACCCCACCGTCACAGGACCACAACGTCACAGGACCCCCACCGTCACAGGACCACACCGTCACAGGACCCCCACCGTCACAGGACCCCCACCGTCACAGGACCCCACCGTCACAGGACCCCACCGTCACAGGACCCCACCGTCACAGGACCCCACCGTCACAGGACCCCACAGGACCACACCGTCACAGGACCCCACCGTCACAGGACCACACCGTCACAGGACCCCACCGTCACAGGACCCCCACCGTCACAGGACCACACCGTCACAGGACCCCACCGTCACAGGACCCCACCGTCACAGGACCCCACCGTCACAGGACCCCACCGTCACAGAACCCCACAGGACCCCACCGTCACATGACCCCACCTTCACAGGACCACACCGTCACAGGACCACACCGTCACAGGACCCCACCTTCACAGGACCCCACCGTCACAGGACCACACCGTCACAGGACCACACCGTCACAGGACCCCCACCGTCACAGGACCCCACCGTCACAGGACCCCACAGGACCCCACCGTCACAGGACCCCACCGTCACAGCACCCCACAGGACCCCACCGTCACAGCACCCCACCATCACAGGACCCCACCTTCACAGGACCCCACCGTCACAGGACCCCACAGGACCCCACCTTCACAGGACCCCACCGTCACAGGACCCCACCGTCACAGGACCCCACAGGACCCCACCGTCACAGGACCCCACCGTCACAGGACCCCACAGGACCCCACCGTCACAGGACCCCACCGTCAAAGGACCCCACCGTCACAGGACCCCACAGGACCCCACAGGACCCCACCATCACATGACCCCACCGTCACAGGACCCCACAGGACCCCACAGGACCCCACCGTCACAGGACCCCACCGTCACAGGACCACACCGTCACAGGACCCCACCGTCACAGGACCCCACCGTCACAGGACCCCACCGTCACAGGACCCCACAGGACCACACTGTCACAGGACCCCACCGTCACAGGACCCCACCGTCACAGGACCCCACCGTCACAGGACCCCACAGGACCCCACCATCACAGGACCACACCGTCACAGGACCCCCACCGTCACAGGACCCCACCGTCACAGGACCCCACCGTCACAGGACCCCACCGTCACAGGACCCCACTGGACCCCACCGTCACAGGACCCCACCGTCACAGGACCCCACCGTCACAGGACCCCACAGGACCCCACCGTCAGAGGACCACACCGTCACAGGACCCCCACCGTCACAGGACCCCACCGTCACAGGACCCCACCGTCACAGGACCACACCGTCACAGGACCCCACCGTCACAGGACCCCACCGTCACAGAACCCCACAGGACCCCACCGTCACAGAACCCCACAGGACCCCACCGTCACATGACCCCACCTTCACAGGACCACACCGTCACAGGACCCCACTTTCACAGGACCCCCACCGTCACAGGACCCCCACCGTCACAGGACCCCCACCGTCACAGGACCCCCACCGTCACAGGACCCCACCGTCACAGGACCCCACCGTCACAGGAACCCACAGGACCCCACCGTCACAGGACCCCACCGTCACAGCACCCCACCATCACAGGACCCCACAGGACCCCACCTTCACAGGACCCCACCGTCACAGGACCCCACAGGACCCCACCGTCACAGGACCCCACCGTCACAGGACCCCACCGTCACAGGACCCCACTGTCACAGGACCCCACAGGACCCCACCGTCACATGACCCCACCGTCACAGGACCCCACCGTCACAGGACCCCACCGTCACAGGACCCCACAGGACCCCACCGTCACAGGACCCCACCGTCACAGGACCCCACAGGACCCCACCGTCACAGGACACCACCGTCACAGGACCCCACCGTCACAGGACCCCACCGTCACGTGACCCCACCGTCACAGGACCCCACAGGACCCCACAGGACCCCACCGTCACAGGACCCCATCGTCACAGGACCCCACCGTCACAGGACCCCACCGTCACAGGACCCCACCGTCACAGGACCAGACCGTCACAGGACCACACCGTCACTCATTTAG

Function

NR:

description
PREDICTED: pre-mRNA 3' end processing protein WDR33-like, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036958448.1 True 2235 mRNA 0.67 1 1671059 1673293

Neighbor

gene id symbol gene type direction distance location
LOC110500915 LOC106576535 coding upstream 1839 1607414 ~ 1669220 (+)
LOC110517600 rab3ip coding upstream 70977 1517362 ~ 1600082 (+)
LOC110499710 LOC106596118 coding upstream 171003 1489693 ~ 1500056 (+)
LOC110499702 tcpb coding upstream 183894 1476880 ~ 1487165 (+)
LOC118943024 NA coding upstream 186891 1484027 ~ 1484168 (+)
LOC110499743 cnot2 coding downstream 15649 1688942 ~ 1769720 (+)
LOC110536528 kcnmb4 coding downstream 108590 1781883 ~ 1855471 (+)
LOC110499712 LOC106576627 coding downstream 420473 2093766 ~ 2102425 (+)
LOC118942829 LOC105023115 coding downstream 585423 2258716 ~ 2443078 (+)
LOC110490688 NA coding downstream 772313 2445606 ~ 2447635 (+)
G1699837 NA non-coding upstream 42278 1628357 ~ 1628781 (+)
G1699827 NA non-coding upstream 77731 1593129 ~ 1593328 (+)
G1699826 NA non-coding upstream 78443 1592390 ~ 1592616 (+)
G1699819 NA non-coding upstream 98241 1571631 ~ 1572818 (+)
G1699812 NA non-coding upstream 108867 1560132 ~ 1562192 (+)
G1699852 NA non-coding downstream 609 1673902 ~ 1679900 (+)
G1699856 NA non-coding downstream 8389 1681682 ~ 1682227 (+)
G1699863 NA non-coding downstream 39413 1712706 ~ 1714944 (+)
G1699872 NA non-coding downstream 65758 1739051 ~ 1739763 (+)
G1699877 NA non-coding downstream 87144 1760437 ~ 1762078 (+)
G1699804 NA other upstream 132179 1537956 ~ 1538880 (+)
G1699724 LOC106592130 other upstream 327921 1342499 ~ 1343138 (+)
LOC110518351 LOC103459268 other upstream 366326 1156714 ~ 1305903 (+)
G1699655 NA other upstream 570838 1094149 ~ 1100221 (+)
G1699934 NA other downstream 194401 1867694 ~ 1869554 (+)
LOC110519348 tbc1d15 other downstream 966047 2588642 ~ 2667278 (+)
G1701265 NA other downstream 1171411 2844704 ~ 2849603 (+)
G1701596 NA other downstream 2100746 3774039 ~ 3776261 (+)

Expression


Co-expression Network