LOC110536528 (kcnmb4)


Basic Information

Item Value
gene id LOC110536528
gene name kcnmb4
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 1781883 ~ 1855471 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036956586.1
TGTGTCCTAAAGCTTAATGACGTAGGTCATTATTTGTGTTATTGAACGTGTTAACAGTAACTAGCTTAGCCTAGTCTGTCAACAGGTGCACCCTGTAGTGATGCGTCAAAACAATACCGTCCAATCAGCGTAATGAAGTTGGTAACATTGGTGTCAGCAGAAGAGACCTATTTTTAACTGTAGAAAGCTCCTCGCCTCGGGCTATATAGGCTGGTCCTCAGACCTCTCGGCACCGCGAGCAGAGAGAGCGGGCTCCATCTCTAAAGGGGCAAAAGTAGACCAGTTTGTCCACAGCGAAGTGATGGATGTCGGAGCCAGGGACGGCGAGGGACCGCTGCAGCGCATCATCTGATCGCCAGTCAAGGGAGGGGCATTCACTCCGAACCTAATCCCAGATGCAACATCCAGCCTTTCAGCAAAATCCACATCTCTACGGACCGTTGTGATATGAAGTAGATATCACGCGCATAAGagcgaggggaggagaggggcaggCACAGGCTGGACCGCAGCTGCCCCGCTTTCGCAAAGTTCTCCATACAGAAGAGAGAGCGCGGAGGCCGGTTGAGTGAGAGGGACGTTTTCCTAGAGGCTGCCAGTGTTTGGGGCAACacagcgcagagagagagagagaagcccctCTCCAGCTCTCCTCTCCGTCACTTTCGAGCTCTTTTCAGACCGAGGAGGAGCATAATGGCGAAAATGAGGGTGTCATACGAGTACTCGGAGGCGGAGGATAAGAGTATCCGACTAGGACTGTTCCTCATCGTCTGTGGtatcctctccctctttatcctcGGGTTCTGCTGGCTCAGTCCAACTCTACAGAGCATGCAGAGCAAACCGGCCAACTGCACGGTGGTGTCCGTGCTCAGACCGGAGGAGATGTTCGAGTGCGTGTTCACGTGCGGGGCGGACTGCAAGGGGACCTCGCTGTATCCGTGTCTGCAGATATTCGTCAATAATTCCGAGTCGAACTCCGTGGCTCTGCTGCACTTTGATGAACAGCAACTGGTGCTGAACCCAAAGtgcTCGTACGTTCCTCCATGTGAGAGGGACAACCAGAAGAACAAGGACAACGTTCTGTGGTGGGAGGACTACTGGACTAAAGAGGTCAGCTCCCAATCCTTCACCTGTTTCTTCAACCAGCAGAGAAGGCCTGACGACGTACTGTGGCGGCGCTCCCACGACGCCAGCGTCCTCCTCCACTGCGTCCTGTGGCCCATGGTGAGCCTGCTGGTGGGTACCCTCATCGTCCTTCTCACCGTGTGCGCCCGCAGCCTGGCCGTGCGCGCCGAGGCCATCCAAAAGAGGAAGTGCTCGTACGAGCCGGCAGGCAACTCAGAGCAGGGCAAGACGCCGCCCAACACCAACACCGCCTCCTTCCGGACCCTGCCGATGTTCGCTGTCCCTGTCCGACGCAGAGACCGGGAACAGGAACACTAGATGGATGGATTGATAGATTGATGATGACTGTGGTCTCAGTGGTGGTTGTTGTGTGATGAGGACCTCATAGAAGCGGGGAATGTTTGAACTTCCCTATTATGACTGTTCTGAACACTCTCATTCCGCTGGACTGGACTCGAGGCTCATGCACAAGAAATGCTTGTCTGTCttgtctatgtgtgtttgtctACTTGTGTAAGAGCCATTTTGTCAGTTCAACTCTCAGCTGGTGAGGGCCTTTTCTAATGCTCTGTGTATTACAGTGCGTTGGTTATGTCTATGACTAAGCAAAAATCCCAAAAGGACAATGCCGCTTTCTGTCACTGGTCATGTTTTGGACAGGTCTGTGTTACGTGTTgagcctctgtgtctctgtgctgatTGTAATGTTATTTGTGTTTACTTCACTAGCCGAGCTCGGTCTCAAAGTTCAGAGTTCACTGACTTACAAACAGGAAATGTCTGTTACCTTTGAACTCTCTTTAAATAGACTCTTCATTACAAACCCCTGGTCGTATGAAAGGAGGGATCGTGAGGGCTACCCGGCCAGGACCACCTGAGAAGAATCTTCAACACCAGTTACACAAAATGCCAGTGCTTTGTTCAGAGAGAATGCGGTGAAAGGAATTCTGGGAGAGTCCTTCTAATCTCTGGGACGACAGAGCCAGTAGCAGACCTTGGTCTGATCACCCCCAGCATGATGTACGGTCTTCTTCTCTAGGTGGTATTAGGAAGTGTTTAAATGCCTATCTCACTGTTACTGTTCTTTAACACCCCGGGCCACGATTTAAACAAATCGCAACAATGTGTATATTACTTTTAAAGGCATATTACGGTTTGTTTTAATCcggttccccctctctctcctctctgtaccaCCTGCCTTTTACTAAACCTGTTTCTAACAAGGCTTCTTTAAGGCATCTGTCCAACTACAGCCAACCCAACCGCCATGGACGGAATATGTCTGTTGTTCATTTTCAGTTGGTTGCCGCAGGACATGTTTGAACCTATTTGGTCCCGATTCAATATGTAGACTGGGCCACGGACAGCTGGTCTGGGTTCAATATGTAGACTGGGCCATGGACAGTTGGTCTGGGTTCAATATGTAGACTGGGCCACGGACAGCTGGTCTGGGTTCAATATGTAGACTGGGCCACGGACAGCTGGTCTGGGTTCAATATGTAGACTGGGCCACGGACAGTTGGTCTGGGTTCAATATGTAGACTGGGCCATGGACAGTTGGTCTGGGTTCAATATGTAGACTGGGCCACGGACAGTTGGTCTGGGTTCAATATGTAGACTGGGCCACGGACAGTTGGTCTGGGTTAAATATGTAGACTGGGCCATGGACAGTTGGTCTGGGTTCAATATGTAGACTGGGCCAGGGACAGTTGGTCTGGGTTCAATATGTAGACTGGGCCATGGACAGTTGGTCTGGGTTCAATATGTAGACTGGGCCAGGGACAGTTGGTCTGGGTTCAATATGTAGACTGGGCCACGGACAGTTGGTCTGGGTTAAATATGTAGACTGGGCCACAGACAGTTGGTCTGGGTTCAATATGTAGACTGGGCCATGGACAGTTGGTCTGGGTTCAATATGTAGACTGGGCCACGGACAGTTGGTCTGGGTTCGGGACAAAACCTGGGATAGGTAGTTTGTCTGTGGTTGGATAGATGTGCAGATGCCTTGACTGTAGCAACTTCCTCTGCAGTCTGTCTTCTGTCTTACCTTCTGTCAGTTAATGGTTTTAGTTTTTTTCACGATGCAAATTGAATGTGTTTTCTTACCACAGTAGCAGACTTTTGCATCGTTTTGAATAGTTTGTCGTCCGTATGAGTTACCGCTCACCAATTGGTTTGAATAGTTTGTTGTCCGTATGAGTTACCGCTCTCCGATTGGTTTGAATAGTTTGTCGTCCGTTTGTGTTACCGCTCTCCGATTGGTTTGAATAGTTAGTCGTCCGTATGAGTTACTGCTCTCCAATTGGTTTGAATAGTTTGTTGTCCGTATGAGTTACCGCTCTCCGATTGGTTTGAATAGTTTGTCGTCCGCATGTGTTACCGCTCTCCGATTGGTTTGAATAGTTTGTCGTCCATTTGTGTTACCGCTCTCCGATTGGTTTGAATAGTTTGTCGTCCGTTTGTGTTACCGCTCTCCGATTGGTTTGAATAGTTAGTCGTCCGTATGAGTTACCGCTCTTCGATTGGTTTGAATAGTTTGTCGTCCGTATGTGTTACCGCTCTCCGATTGGTTTGAATAGTTTGTCGTCCGTTTGTGTTACCGCTCTCTGATTGGTTTGAATAGTTTGTAGTCCGTATGTGTTACCGCTCTCCGATTGGTTTGAATAGTTTGTCGTCCGTTTGTGTTACCGCTCTCCGATTGGTTTGAATAGTTTGTCGTCCGTTTGTGTTACCACTCTCCGATTGGTTTGAATAGTTTGTCGTCCGTTTGTGTTACCGCTCTCCGATTGGTTTGAATAGTTTGTCGTCCGTTTGTGTTACCGCTCTCCGATTGGTTTGAATAGTTTGTCGTCCGTTTGTGTTACCGCTCTCCGATTGGTTTGAATAGTTTGTCGTCCGTTTGTGTTACCGCTCTCCGATTGGTTTGAATAGTTTGTCGTCCGTTTGTGTTACCGCTCTCCGATTGGTTTGAATAGTTTGTCGTCCGTTTGTGTTACCGCTCTCCGATTGGTTTGAACAGTTAGTAGTACATCCAGTTAATGTTTTCCATCCGATTGGATAAGAGGAGAATGTGATCTGACTACAAATCGTTACACCTACCTACCCTGCTCCAAGAAAAGGTTTGCTCTCGACTGCGTTAATCGGACGTACAGGAGTATTCACTTGTGCATTTTCTACAACAGAAGTAGCTCAGACATTGTTGTCCTTGGCTAAAAGAGGAATGATATTTCATACATAAAGCCATATGCTGAACATGTGATTGCAGTAAGAGGCAGCTCCAGGGGAGGTTATGTCCTCTTACAATAGGAGCTGTAACAGTAGTACTAAACTAATATATTTTGTGTTGGAAAGAGAATGTTTTTTTATAAAGCCAATCTATTTAAAACGCCTGCTGCATAATGATGAGTAATAGTGCCTGATAGATATCTTTAATAAAAAGAATAAGAGTTATTGTCTTAGTTATTACTGCACCATATTCTTCTTCTTTCATTAATACatcttcttcgggatcggtgtcccttccacgggacggttgagctaacgtactgta
>TU1945220
ACTGGGCCACAGACAGTTGGTCTGGGTTCAATATGTAGACTGGGCCATGGACAGTTGGTCTGGGTTCAATATGTAGACTGGGCCACGGACAGTTGGTCTGGGTTCGGGACAAAACCTGGGATAGGTAGTTTGTCTGTGGTTGGATAGATGTGCAGATGCCTTGACTGTAGCAACTTCCTCTGCAGTCTGTCTTCTGTCTTACCTTCTGTCAGTTAATGGTTTTAGTTTTTTTCACGATGCAAATTGAATGTGTTTTCTTACCACAGTAGCAGACTTTTGCATCGTTTTGAATAGTTTGTCGTCCGTATGAGTTACCGCTCTCCGATTGGTTTGAATAGTTTGTCGTCCGCATGTGTTACCGCTCTCCGATTGGTTTGAATAGTTTGTCGTCCATTTGTGTTACCGCTCTCCGATTGGTTTGAATAGTTAGTACATCCAGTTAATGTTTTCCATCCGATTGGATAAGAGGAGAATGTGATCTGACTACAAATCGTTACACCTACCTACCCTGCTCCAAGAAAAGGTTTGCTCTCGACTGCGTTAATCGGACGTACAGGAGTATTCACTTGTGCATTTTCTACAACAGAAGTAGCTCAGACATTGTTGTCCTTGGCTAAAAGAGGAATGATATTTCATACATAAAGCCATATGCTGAACATGTGATTGCAGTAAGAGGCAGCTCCAGGGGAGGTTATGTCCTCTTACAATAGGAGCTGTAACAGTAGTACTAAACTAATATATTTTGTGTTGGAAAGAGAATGTTTTTTTATAAAGCCAATCTATTTAAAA

Function

symbol description
kcnmb4 Enables calcium-activated potassium channel activity. Involved in detection of calcium ion; neuronal action potential; and potassium ion transport. Is integral component of plasma membrane. Part of voltage-gated potassium channel complex.

GO:

id name namespace
GO:0071805 potassium ion transmembrane transport biological_process
GO:0016020 membrane cellular_component
GO:0015269 calcium-activated potassium channel activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036956586.1 False 4684 mRNA 0.48 3 1781883 1855471
TU1945220 True 789 lncRNA 0.42 3 1853767 1855306

Neighbor

gene id symbol gene type direction distance location
LOC110499743 cnot2 coding upstream 12229 1688942 ~ 1769720 (+)
LOC118942986 NA coding upstream 108590 1671059 ~ 1673293 (+)
LOC110500915 LOC106576535 coding upstream 112663 1607414 ~ 1669220 (+)
LOC110517600 rab3ip coding upstream 181801 1517362 ~ 1600082 (+)
LOC110499710 LOC106596118 coding upstream 281827 1489693 ~ 1500056 (+)
LOC110499712 LOC106576627 coding downstream 238295 2093766 ~ 2102425 (+)
LOC118942829 LOC105023115 coding downstream 403245 2258716 ~ 2443078 (+)
LOC110490688 NA coding downstream 590135 2445606 ~ 2447635 (+)
LOC110499733 LOC106609838 coding downstream 653556 2509027 ~ 2531457 (+)
trnak-cuu-138 NA coding downstream 665781 2521252 ~ 2521324 (+)
G1699885 NA non-coding upstream 5311 1775798 ~ 1776572 (+)
G1699882 NA non-coding upstream 9317 1772054 ~ 1772566 (+)
G1699880 NA non-coding upstream 17427 1763963 ~ 1764456 (+)
G1699877 NA non-coding upstream 19805 1760437 ~ 1762078 (+)
G1699933 NA non-coding downstream 8549 1864020 ~ 1867071 (+)
G1699937 NA non-coding downstream 18584 1874055 ~ 1874660 (+)
G1699944 NA non-coding downstream 28449 1883920 ~ 1884323 (+)
G1699948 NA non-coding downstream 39594 1895065 ~ 1896006 (+)
G1699963 NA non-coding downstream 61591 1917062 ~ 1918379 (+)
G1699804 NA other upstream 243003 1537956 ~ 1538880 (+)
G1699724 LOC106592130 other upstream 438745 1342499 ~ 1343138 (+)
LOC110518351 LOC103459268 other upstream 477150 1156714 ~ 1305903 (+)
G1699934 NA other downstream 12223 1867694 ~ 1869554 (+)
LOC110519348 tbc1d15 other downstream 783869 2588642 ~ 2667278 (+)
G1701265 NA other downstream 989233 2844704 ~ 2849603 (+)
G1701596 NA other downstream 1918568 3774039 ~ 3776261 (+)
G1701654 NA other downstream 2077316 3932787 ~ 3936037 (+)
G1699922 NA non-coding upstream 7639 1845502 ~ 1846128 (+)
G1699912 NA non-coding upstream 37350 1816035 ~ 1816417 (+)
G1699907 NA non-coding upstream 45574 1807875 ~ 1808193 (+)
G1699901 NA non-coding upstream 50873 1801798 ~ 1802894 (+)
G1699897 NA non-coding upstream 55986 1797339 ~ 1797781 (+)

Expression


Co-expression Network