Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC118942989 |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 5052618 ~ 5060318 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| C-type lectin |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_036958452.1 | True | 729 | mRNA | 0.52 | 4 | 5052618 | 5060318 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118936570 | mdm1 | coding | downstream | 82227 | 4932214 ~ 4970391 (-) |
| ifng | ifngamma1 | coding | downstream | 274537 | 4756753 ~ 4778081 (-) |
| LOC118942988 | NA | coding | downstream | 323887 | 4723028 ~ 4728731 (-) |
| LOC110516460 | LOC106593189 | coding | downstream | 348095 | 4692883 ~ 4704523 (-) |
| LOC110499732 | dyrk2 | coding | downstream | 416083 | 4611882 ~ 4636619 (-) |
| LOC110518655 | LOC106592876 | coding | upstream | 142496 | 5202814 ~ 5224336 (-) |
| LOC118942990 | NA | coding | upstream | 165751 | 5226069 ~ 5228087 (-) |
| LOC118942834 | LOC106576655 | coding | upstream | 175922 | 5236240 ~ 5313033 (-) |
| LOC118942837 | b2mg | coding | upstream | 360556 | 5420336 ~ 5426626 (-) |
| LOC110491894 | b2m | coding | upstream | 374958 | 5435276 ~ 5452253 (-) |
| G1703144 | NA | non-coding | downstream | 2379 | 5049859 ~ 5050239 (-) |
| G1703143 | NA | non-coding | downstream | 2912 | 5048455 ~ 5049706 (-) |
| G1703141 | NA | non-coding | downstream | 10439 | 5040187 ~ 5042179 (-) |
| G1703127 | NA | non-coding | downstream | 13910 | 5014764 ~ 5038708 (-) |
| G1703133 | NA | non-coding | downstream | 26919 | 5024686 ~ 5025699 (-) |
| G1703109 | NA | non-coding | upstream | 27787 | 5088105 ~ 5113038 (-) |
| G1703162 | NA | non-coding | upstream | 35455 | 5095773 ~ 5096737 (-) |
| G1703165 | NA | non-coding | upstream | 46902 | 5107220 ~ 5107517 (-) |
| G1703108 | NA | non-coding | upstream | 52821 | 5113139 ~ 5114445 (-) |
| G1703167 | NA | non-coding | upstream | 57433 | 5117751 ~ 5118194 (-) |
| G1703085 | NA | other | downstream | 105207 | 4946598 ~ 4947411 (-) |
| G1702914 | NA | other | downstream | 607699 | 4442249 ~ 4444919 (-) |
| LOC110499739 | grip1 | other | downstream | 1464031 | 3585864 ~ 4306764 (-) |
| G1702141 | NA | other | downstream | 1534241 | 3281102 ~ 3518377 (-) |
| G1703190 | NA | other | upstream | 140509 | 5200387 ~ 5202057 (-) |
| G1703200 | NA | other | upstream | 172317 | 5232635 ~ 5235225 (-) |
| G1703323 | NA | other | upstream | 369150 | 5429468 ~ 5430889 (-) |
