vhll


Basic Information

Item Value
gene id vhll
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 5478445 ~ 5480899 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036956676.1
ATTGGTTTAGGGAATGACATCGTCGTGGCATTCTGAGTGTCACTGTCGTCATGGAGGAGCAGGAAGTAGTGAGCGGGGAAAATAAAGCTCTCCGGTCTCTAAATGCTGATGTCGAAACCCACGTTAATTTTATTAATCAGTCGAAACAAAGCGCCCGAGCATGGTGGTTGGATTATTCCGGACATCCAGTTTCTTATGGCGATATACGAACGGACGGGTTGTTACGTATGGATACTTTTCTGACGCATCCATGGGTTTTCAGAGCCTCTCGAAATGGGGCGAAACTTTTAGCTAATCAGCAAGATGTTTATATGCCAACAGCTGCCACCGAATATGAAGAGGATGGTAAACCCAAGTTTCTGAATGTTGTCATAGCTACCCCAGtgtACTCTCTGCAGGAGTGTTGTCTGATGCTAATCCGTAATCTGGTAGAAGAGGAGGACTACGGCAGACTGGACATCCCCGAGTCACTGAAGACTGACCTCAGACAACGGCCTGACTTACTGAAGGAGCTGGGACTCATCAACCGTCTCAGAATAGGAGTGTTGACCTAGGATCAGTTGTATcgtttagatcacaatgaatcagattacatggacaggggggggggggtgacctgatcctagatcagctctcaTACTCTGAGAAGCTTTATGCATAACAGGCCACTGAATAATGGACTTTCTGTTGACCAAatgtactgcccccccccccccccctcctgctctGAACTCGGTGGTGGCTCTAGAACAGTGGAAGTCAATGTCAGGTTCGGGGAACTGCAGTAGGGTCGCGAATTAAAAGTACTTATTATTATAAAGAGTACATATTATTGTATGGgacaaaaaataaaacaaatgtaaataaataaat
>XM_036956677.1
TTGTGATTGGTTTAGGGAATGACATCGTCGTGGCATTCTGAGTGTCACTGTCGTCATGGAGGAGCAGGAAGTAGTGAGCGGGGAAAATAAAGCTCTCCGGTCTCTAAATGCTGATGTCGAAACCCACGTTAATTTTATTAATCAGTCGAAACAAAGCGCCCGAGCATGGTGGTTGGATTATTCCGGACATCCAGTTTCTTATGGCGATATACGAACGGACGGGTTGTTACGTATGGATACTTTTCTGACGCATCCATGGGTTTTCAGAGCCTCTCGAAATGGGGCGAAACTTTTAGCTAATCAGCAAGATGTTTATATGCCAACAGCTGCCACCGAATATGAAGAGGATGtgtACTCTCTGCAGGAGTGTTGTCTGATGCTAATCCGTAATCTGGTAGAAGAGGAGGACTACGGCAGACTGGACATCCCCGAGTCACTGAAGACTGACCTCAGACAACGGCCTGACTTACTGAAGGAGCTGGGACTCATCAACCGTCTCAGAATAGGAGTGTTGACCTAGGATCAGTTGTATcgtttagatcacaatgaatcagattacatggacaggggggggggggtgacctgatcctagatcagctctcaTACTCTGAGAAGCTTTATGCATAACAGGCCACTGAATAATGGACTTTCTGTTGACCAAatgtactgcccccccccccccccctcctgctctGAACTCGGTGGTGGCTCTAGAACAGTGGAAGTCAATGTCAGGTTCGGGGAACTGCAGTAGGGTCGCGAATTAAAAGTACTTATTATTATAAAGAGTACATATTATTGTATGGgacaaaaaataaaacaaatgtaaataaataaat

Function

NR:

description
von Hippel-Lindau disease tumor suppressor-like isoform X3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036956676.1 False 873 mRNA 0.46 3 5478445 5480894
XM_036956677.1 True 839 mRNA 0.46 3 5478445 5480899

Neighbor

gene id symbol gene type direction distance location
LOC110491889 b2m coding downstream 22090 5452948 ~ 5456355 (-)
LOC110491894 b2m coding downstream 26192 5435276 ~ 5452253 (-)
LOC118942838 NA coding downstream 28517 5443959 ~ 5449928 (-)
LOC118942837 b2mg coding downstream 51819 5420336 ~ 5426626 (-)
LOC118942834 LOC106576655 coding downstream 165412 5236240 ~ 5313033 (-)
LOC110511232 wif1 coding upstream 15320 5496219 ~ 5561423 (-)
LOC118942840 NA coding upstream 203563 5652498 ~ 5686229 (-)
LOC118942841 NA coding upstream 207046 5687945 ~ 5822290 (-)
LOC118942843 NA coding upstream 469971 5950034 ~ 5963423 (-)
LOC110499738 lmo3 coding upstream 586236 6067135 ~ 6188810 (-)
G1703330 NA non-coding downstream 10589 5466569 ~ 5467856 (-)
G1703315 NA non-coding downstream 29665 5362420 ~ 5448780 (-)
G1703314 NA non-coding downstream 29958 5361761 ~ 5448487 (-)
G1703323 NA non-coding downstream 47556 5429468 ~ 5430889 (-)
G1703316 NA non-coding downstream 108901 5369094 ~ 5369544 (-)
G1703334 NA non-coding upstream 962 5481861 ~ 5482386 (-)
G1703550 NA non-coding upstream 18818 5499717 ~ 5500536 (-)
G1703573 NA non-coding upstream 102258 5583157 ~ 5585446 (-)
G1703574 NA non-coding upstream 102712 5583611 ~ 5586059 (-)
G1703560 NA non-coding upstream 117638 5598537 ~ 5599225 (-)
G1703200 NA other downstream 243220 5232635 ~ 5235225 (-)
G1703658 NA other upstream 418443 5899342 ~ 5899781 (-)
G1703669 NA other upstream 510799 5984365 ~ 5996426 (-)
G1703878 NA other upstream 824654 6305553 ~ 6308220 (-)
G1703896 NA other upstream 861842 6342741 ~ 6343182 (-)

Expression


Co-expression Network