LOC118942841


Basic Information

Item Value
gene id LOC118942841
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 5687945 ~ 5822290 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036956686.1
tcattcTCATTCAGTGAGTAGGCTGGTTTCGTGTGGGCTGTGGAGATGCATTTATAATgccctctgtttttttttttgtagtctTGCCAATCCCATGTAAAAACTCTCGCCCCCGGGGGTCATATAGCCTATAGGGTATAAACGTCTAGTTATTGCTATTTGTCCGGCAAAAATCGTGACACGTGGATTTGACAGTGCGGCAGCTGTCACCATTTCATTTCAATAGTTCTCCCGCTCATTTGTAACGACAGGAGCTGAAATTCCAATCGATCACGGGCTTATTTTATCACCGAAAGCCACCCCCCACCCACTTCGACAGAAAGGGGAGAcggggagttttttttttttttcctgagcCAAATACCGAAGTGGGCAGCACGTGCTGTTCATAATACACTCAAGCAACATCTCCCTCCAGGcattttttttttccatttttgtttttcttttcagtAGCACAAATTTATTCCGATTCATTTTAATAGCCGACCCGCCGGTTGATTCGTGCATTAGTTTACAACAAGAGGATTCCCCCCTTTCAAACTTTTGCACCAGGACGTCCGGTGGCTGGCGGTGTGGTCGGTTGGTGTGCAGGCGGGTAGGGCAGGATAGGCTCCAGGCTGACCGTGTGTGTAAGTACAGTAGACTAGAAGCTGCTGCAAGAGAGATTACTATTTTGGTACAAAGTCACAATGAGTGCACGCGGTGAAGAAGCCGGGGAGAGTTCAGGGACCGGGACCCAGGAGCCGGAGCCTGCGGCGGCTGCAGAGGCTCCGGCCAAGCGCAGACCGGGCAGACCGAGGAAGCCTGTTAAGGAACCTACTGGAGAGCCCGTCCCTAAACGACCAAGGGGTCGTCCCAGAGGCAGCAAGAACAAATGCCCCTCCAAGGCAGCTGCCAGGAAAGCCCTGGCCTCTGGAGAGAAGAGACCGAGAGGCAGACCCAGGAAATGGCCAAAGCAGGTGGTCCAAAAGCCAACTCAGgaagaaggaggagaagaaggagaagaagaagaagaagaagaagaggaaggggaggagtctGGAGAGGAGGATTAAAGAACAACAATCATTTGACCTCTACTTCCTTGTAAACAGTTCTTCCTCCTGGGGAACCACTGCCTTTCACCACTTACTAAGGACGTTGatccatgacctctgacctctgtctaCTCTCATATCATACTGTTTTCATTTAATACTTttgtttgtgtttatttttttattttattttatttgtttgtttgttgttgattCTGAGATGAACACACGTTAATAATCCTCAGAACATGagccgcaaaaaaaaaaaaaaaaaacac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036956686.1 True 1318 mRNA 0.47 5 5687945 5822290

Neighbor

gene id symbol gene type direction distance location
LOC118942840 NA coding downstream 1729 5652498 ~ 5686229 (-)
LOC110511232 wif1 coding downstream 126522 5496219 ~ 5561423 (-)
vhll NA coding downstream 207046 5478445 ~ 5480899 (-)
LOC110491889 b2m coding downstream 231590 5452948 ~ 5456355 (-)
LOC110491894 b2m coding downstream 235692 5435276 ~ 5452253 (-)
LOC118942843 NA coding upstream 128580 5950034 ~ 5963423 (-)
LOC110499738 lmo3 coding upstream 244845 6067135 ~ 6188810 (-)
LOC118942797 NA coding upstream 695598 6517888 ~ 6518853 (-)
LOC118942845 LOC106590959 coding upstream 1068233 6890523 ~ 6917536 (-)
LOC118942846 LOC105029310 coding upstream 1226606 7048896 ~ 7050907 (-)
G1703600 NA non-coding downstream 12583 5674649 ~ 5675362 (-)
G1703592 NA non-coding downstream 41131 5646277 ~ 5646814 (-)
G1703559 NA non-coding downstream 51984 5600482 ~ 5635961 (-)
G1703590 NA non-coding downstream 54817 5630823 ~ 5633128 (-)
G1703638 NA non-coding upstream 16710 5839000 ~ 5839232 (-)
G1703639 NA non-coding upstream 17567 5839857 ~ 5840065 (-)
G1703642 NA non-coding upstream 21891 5844181 ~ 5844536 (-)
G1703644 NA non-coding upstream 26202 5848492 ~ 5848734 (-)
G1703645 NA non-coding upstream 28041 5850331 ~ 5850603 (-)
G1703323 NA other downstream 257773 5429468 ~ 5430889 (-)
LOC118942837 b2mg other downstream 261353 5420336 ~ 5426626 (-)
LOC118942834 LOC106576655 other downstream 374972 5236240 ~ 5313033 (-)
G1703200 NA other downstream 452720 5232635 ~ 5235225 (-)
G1703658 NA other upstream 77052 5899342 ~ 5899781 (-)
G1703669 NA other upstream 169408 5984365 ~ 5996426 (-)
G1703878 NA other upstream 483263 6305553 ~ 6308220 (-)
G1703896 NA other upstream 520451 6342741 ~ 6343182 (-)

Expression


Co-expression Network