LOC110527635 (LOC106590880)


Basic Information

Item Value
gene id LOC110527635
gene name LOC106590880
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 5986775 ~ 5993790 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036956687.1
AACCGCAGATCTGGCGGAAGTCCAAATATTCGCCccccttttttcttcttctgaaaCTGCCTGAACAAACCGCCCACAACGGCGCAGTCTAACAGGCTGGTACTTTTCCCTGGCTCCGAGTCAAAACCAAAGACGAAGTTTCTTGAAAAGCGAGACTCGAACCGAACAGCCATGGCAGAGCTAACTCATATGATAGACAGCGAGGTGTTCCTGGCCTTCTCTACCTACGCCACTATCGTCGTCCTCAAGATGATGCTGATGTCTCCTATGACTGGATACTTCCGCATCACGAGAAAGGCATTTGCTAACCAGGAGGACACCAGTCTGGCCTCCTCTACGGAGGACAAGAAGAAGCTGGTCAGGGTGGATCCTGATGTGGAGAGAGTACGAAGaTGCCACCAGAACGACCTGGAGAACATCATCCCGTTCGTAGTGATTGGTCTGCTGTATACCCTGACGGGGCCCGACCTCTCCACTGCTCTGCTCCACTTCCGGGTGTTTGTTGGTTCCAGGCTCTTCCACACGGTGGCCTACGTCCTCCCCCTGCCCCAACCCAGCAGAGCTGTGGCCTTCCTCATCGGACTGGTCACCACCAGCTCTATGGCCTCTAGGGTTCTGATTACTGCGCTTTATCTGTAGAGGCctgaggggacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacaccactacaagGGCCTTGTCTTTGAGGGTCTCCATTGAATGTGCTTGAGGAGGA
>XM_036956688.1
AACCGCAGATCTGGCGGAAGTCCAAATATTCGCCccccttttttcttcttctgaaaCTGCCTGAACAAACCGCCCACAACGGCGCAGTCTAACAGGCTGGTACTTTTCCCTGGCTCCGAGTCAAAACCAAAGACGAAGTTTCTTGAAAAGCGAGACTCGAACCGAACAGCCATGGCAGAGCTAACTCATATGATAGACAGCGAGGTGTTCCTGGCCTTCTCTACCTACGCCACTATCGTCGTCCTCAAGATGATGCTGATGTCTCCTATGACTGGATACTTCCGCATCACGAGAAAGGCATTTGCTAACCAGGAGGACACCAGTCTGGCCTCCTCTACGGAGGACAAGAAGAAGCTGGTCAGGGTGGATCCTGATGTGGAGAGAGTACGAAGaTGCCACCAGAACGACCTGGAGAACATCATCCCGTTCGTAGTGATTGGTCTGCTGTATACCCTGACGGGGCCCGACCTCTCCACTGCTCTGCTCCACTTCCGGGTGTTTGTTGGTTCCAGGCTCTTCCACACGGTGGCCTACGTCCTCCCCCTGCCCCAACCCAGCAGAGCTGTGGCCTTCCTCATCGGACTGGTCACCACCAGCTCTATGGCCTCTAGGGTTCTGATTACTGCGCTTTATCTGTAGAGGCctgaggggacacacacacacacacacacacacacacaccactacaagGGCCTTGTCTTTGAGGGTCTCCATTGAATGTGCTTGAGGAGGA

Function

NR:

description
microsomal glutathione S-transferase 1

GO: NA

KEGG:

id description
K00799 GST, gst; glutathione S-transferase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036956687.1 False 795 mRNA 0.53 4 5986775 5993790
XM_036956688.1 True 733 mRNA 0.54 5 5986775 5993790

Neighbor

gene id symbol gene type direction distance location
LOC118942842 LOC106575061 coding upstream 134 5979351 ~ 5986641 (+)
LOC118936346 dera coding upstream 107484 5865290 ~ 5879297 (+)
LOC110519381 LOC106576618 coding upstream 330188 5611886 ~ 5657179 (+)
LOC110511233 LOC107655547 coding upstream 388723 5563222 ~ 5598052 (+)
LOC118942839 NA coding upstream 391378 5593681 ~ 5595397 (+)
mrps33 mrps33 coding downstream 234291 6228081 ~ 6252333 (+)
LOC110500907 braf coding downstream 266023 6259813 ~ 6304321 (+)
LOC118942844 large1 coding downstream 719130 6712920 ~ 6879730 (+)
LOC118942849 arhgap8 coding downstream 1533737 7527527 ~ 7561975 (+)
LOC118942991 NA coding downstream 1567554 7561344 ~ 7574758 (+)
G1703435 NA non-coding upstream 35692 5950516 ~ 5951083 (+)
G1703466 NA non-coding upstream 42626 5941409 ~ 5944149 (+)
G1703457 NA non-coding upstream 73146 5913218 ~ 5913629 (+)
G1703456 NA non-coding upstream 76519 5909955 ~ 5910256 (+)
G1703451 NA non-coding upstream 89246 5897213 ~ 5897529 (+)
G1703478 NA non-coding downstream 4842 5998632 ~ 5999038 (+)
G1703483 NA non-coding downstream 17576 6011366 ~ 6013717 (+)
G1703490 NA non-coding downstream 35549 6029339 ~ 6030265 (+)
G1703499 NA non-coding downstream 59714 6053504 ~ 6066427 (+)
G1703500 NA non-coding downstream 61704 6055494 ~ 6126262 (+)
G1703391 NA other upstream 269074 5717199 ~ 5717701 (+)
G1702856 NA other upstream 731890 5254165 ~ 5254885 (+)
LOC110516940 LOC106609861 other upstream 797928 5182911 ~ 5200193 (+)
G1702793 NA other upstream 932311 5052447 ~ 5054464 (+)
G1703953 NA other downstream 412242 6406032 ~ 6406773 (+)
G1704232 NA other downstream 1013379 7007169 ~ 7007740 (+)
G1704409 NA other downstream 1155610 7149400 ~ 7149993 (+)

Expression


Co-expression Network