LOC118942850


Basic Information

Item Value
gene id LOC118942850
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 7803280 ~ 7805680 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005038486.1
GTTCTACTGCCTCACTGATACTACTATAGACTGTCTAATAATACACAGCCTGCAGGCCTTCAGTGATAGAGGGGGTTGGATAGGCCTTCAGTGATTGGTATAGAGGGGTTGGATAGGCCTTCAGTGATTGGTATAGAGGGGTTGGATAGGCCTTCAGTGATTGGTATAGAGGGGTTGGTAGGCCTTCAGTGATTGGTATAGAGGGGTTGGATAGGTCTTCAGTGATTGGTATAGAGGGGGTTGGGTAGGCCTTCAGTGATTGGTATAGAGGGGGCTGGATAGGCCTTCAGTGATTGGTATTGAGGGGGTTGGATAGGTCTTCAGTGATTGGTATAGAGGAGGTTGGATAGGCCTTCAGTGATTGGTATAGAGGAGGTTGGATAGGCCTTCAGTGATTGGTATAGAGGGGGTTGGTAGGCCTTCAGTGATTGGTATAGAGGGGGTTGGTAGGCCTTCAGTGATTGGTATAGAGGGGGTTGGATAGGCCTTCAGTGATTGGTATAGAGGGGTTGGATAGGCCTTCAGTGATAGAGGGGTTGGGTAGGCCTTCAGTGATTGGTATAGATGGGGTTGGATAGGCCTTCAGTGATTGGTATAGAGGGGTTGGATAGGCCTTCAGTGATAGAGGGGTTGGGTAGGCCTTCAGTGATTGGTATAGATGGGGTTGGATAGGCCTTCAGTGATTGGTATAGAGGGGTTGGATAGGCCTTCAGTGATAGAGGGGTTGGGTAGGCCTTCAGTGATTGGTATAGAGGGGTTGGTAGGCCTTCAGTGATTGGTATGGAGGGGTTGGGTAGGCCTTCAGTGATTGGTATAGAGGGGTTGGATAGGGCTTCAGTAATTGGTATAGAGGGGTTGGGTAGGCCTTCAGTGATTGGTATGGAGGGGGTTGGATAGGTCTTCAGTGATTGGTATAGAGGAGGTTGGATAGGCCTTCAGTGATAGAGGGGTTGGGTAGGCCTTCAGTGATTGGTATAGAGGGGTTGGATAGGCCTTCAGTGATTGGTATAGAGGGGTTGGATAGGTCTTCAGTGATTGGTATAGAGGAGGTTGGATAGGCCTTCAGTGATAGAGGGGTTGGGTAGGCCTTCAGTGATTGGTATAGAGGGGTTGGATAGGCCTTCAGTGATAGAGGGGTTGGGTAGGCCTTCAGTGATTGGTATAGAGGGGTTGGATAGGCCTTCAGTGATTGGTATAGAGGGGGTTGGATAGGGCTTCAGTGATTGGTATAGAGGGGGTTGGATAGGCCTTCAGTGATTGGTATAGAGGGGTTGGATAGGCCTTCAGTGATTGGTATAGAGGGGTTGGATAGGCCTTCAGTGATTGGTATAGAGGGGTTGGATAGGCCTTCAGTGATTGGTATAGAGGGGTTGGATAGGCCTTCAGTGATTGGTATAGAGGGTTACTCAGGAGCTAGAGAGCTGGTTGGATAGGCCTTCAGTGACGGTAGCCAGCCAAATGACAGCAGTCTACGTATGAGTTAGTTTTATGAGTTATATTTtatgagaaaaaataaataaattaaacacaTTGTCTCCCCTCATCTGCTCCTGACTGCATCtgctgccatagaaatagaatgactagaacgGATGGTGGCATAATGGCAGGACTGGCGGCCATGTTGAGTGTCCCCATAGGAGCAAAGCTAGGTTATAAAATTTGAAGGTTAAAGACACCGGCTTCACAATAATGTTTGAGGTTCTACCTCTCTGAATCAACCATGTGATCAGCTCAGGTATTGGAGCTACGCTGCCTCGGCAGAAGGCAAGCTGTCTGAAACAGATCATGAGGTTGGTAAGGAAATAAAATAGCATTGAAGCTAATGTGAGAAAAGAGACAACcatctagccagctagctaacgtctgGGCTGAAGATTACAAGGTTAATAAGACAGAGGGGTTCTAATATCCCATAATTTGGCGATTCATGGGACCGGCGTTGCTAATTAGCAAGTAGTTTTCAACTGAGCTGGTCCCatgaatttgttttattttcaaaTCCTTCCTGATGGGAGTTATTACGTTGTTgtaaccttgttttttttttaaccttggagcaaagcaggaagtaaaagcaggaagtgtaccctgTGCTGTTATTTGTTGATTCAACTCTACAGACGTTACAAATAATACATTCCATTGTTTGAGCCACATCAGTGAACATCATTTGAataaacattctacattaccatggaaattattacatcacaataccaggcagccatgagtttaccagtcatattaccagggttagaggttccaagcct

Function

NR:

description
PREDICTED: cell wall protein DAN4-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005038486.1 True 2273 mRNA 0.46 3 7803280 7805680

Neighbor

gene id symbol gene type direction distance location
LOC118942991 NA coding upstream 228522 7561344 ~ 7574758 (+)
LOC118942849 arhgap8 coding upstream 241305 7527527 ~ 7561975 (+)
LOC118942844 large1 coding upstream 923550 6712920 ~ 6879730 (+)
LOC110500907 braf coding upstream 1498959 6259813 ~ 6304321 (+)
mrps33 mrps33 coding upstream 1550947 6228081 ~ 6252333 (+)
LOC118936573 LOC105026518 coding downstream 67935 7873615 ~ 7878590 (+)
LOC118942851 NA coding downstream 76569 7882249 ~ 7883321 (+)
yt6j yt6j coding downstream 119336 7925016 ~ 7943584 (+)
LOC118942853 LOC106593275 coding downstream 197735 8003415 ~ 8009468 (+)
LOC118943012 NA coding downstream 198611 8004291 ~ 8004425 (+)
G1704629 NA non-coding upstream 5707 7797108 ~ 7797573 (+)
G1704627 NA non-coding upstream 9976 7793078 ~ 7793304 (+)
G1704623 NA non-coding upstream 17294 7785629 ~ 7785986 (+)
G1704598 NA non-coding upstream 58391 7744413 ~ 7744889 (+)
G1704549 NA non-coding upstream 98566 7662326 ~ 7704714 (+)
G1704645 NA non-coding downstream 12349 7818029 ~ 7818399 (+)
G1704634 NA non-coding downstream 27631 7833311 ~ 7834957 (+)
G1704636 NA non-coding downstream 31499 7837179 ~ 7839343 (+)
G1704650 NA non-coding downstream 40805 7846485 ~ 7846694 (+)
G1704652 NA non-coding downstream 45231 7850911 ~ 7852297 (+)
G1704562 NA other upstream 145411 7657429 ~ 7657869 (+)
G1704409 NA other upstream 653287 7149400 ~ 7149993 (+)
G1704232 NA other upstream 795540 7007169 ~ 7007740 (+)
G1704651 NA other downstream 43880 7849560 ~ 7850120 (+)
LOC118942994 LOC106591951 other downstream 733248 8538928 ~ 8564807 (+)
G1705229 NA other downstream 1044718 8850398 ~ 8851107 (+)
eps8a LOC106594571 other downstream 1102836 8908286 ~ 9091490 (+)
G1705267 NA other downstream 1169624 8975304 ~ 8976565 (+)

Expression


Co-expression Network