LOC118936573 (LOC105026518)


Basic Information

Item Value
gene id LOC118936573
gene name LOC105026518
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 7873615 ~ 7878590 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036956732.1
TTTGCTTCCCTGATAATAAATCAGCCAATCATGATCAACCCACCCCTTCTAAAAAGAACACAAAAAGGATGGATAAGAGTCACAAGCACATTATTTTTCTTGTCGGGCTGAAAACCAACTGGAAAAAGACAGCTAACCGTCCCAACAATGCATGCCCTGAGGATTCTCCATGTTTTGCTGCTGTCAGTAGCAGTTCATTCTAAGGGGCTGATGTTCCAGCCTCTGGACTGTGCTGATATCTACAACGACGGCTCTAAGACCAGTGGTGTCTACAGGATGTACCCTGCTGGACCCAACTCTCCTCGATACGTCTACTGTGATATGGACACCGACGGAGGGAAATGGACTgTGTTTCAGAGGAGGATGGATGGAACAGTGAACTTCTACAGAGGATGGGACCAGTACAAGAACGGCTTTGGACACGCAGCAGGAGAGTACTGGCTGGGTCTGGACACCATCTACCTCCTGACCCTGAAAAAGAATTACGAGTTGAGGGTGGACATGGAGGACTTTGACGGACAGAAAGCCTACGCTTTCTACTCCTCCTTCGCCATCTCTCCCAAAGTCACAGATCCTGAACTGGATGGCTACAAACTCCAGGTTACTGGCTTTAAAGACGGAGGAGCAGGTGAGAACAGTTTAAACTTCCTTAGAGAAACATCTGGGCTGTATTCATTAGTCCAGAGTTCAGCTAAGTTCCCTCATTCGGTTCTGTTTGattcctagtgaatacaacctGAT
>XM_036956731.1
TTTGCTTCCCTGATAATAAATCAGCCAATCATGATCAACCCACCCCTTCTAAAAAGAACACAAAAAGGATGGATAAGAGTCACAAGCACATTATTTTTCTTGTCGGGCTGAAAACCAACTGGAAAAAGACAGCTAACCGTCCCAACAATGCATGCCCTGAGGATTCTCCATGTTTTGCTGCTGTCAGTAGCAGTTCATTCTAAGGGGCTGATGTTCCAGCCTCTGGACTGTGCTGATATCTACAACGACGGCTCTAAGACCAGTGGTGTCTACAGGATGTACCCTGCTGGACCCAACTCTCCTCGATACGTCTACTGTGATATGGACACCGACGGAGGGAAATGGACTgTGTTTCAGAGGAGGATGGATGGAACAGTGAACTTCTACAGAGGATGGGACCAGTACAAGAACGGCTTTGGACACGCAGCAGGAGAGTACTGGCTGGGTCTGGACACCATCTACCTCCTGACCCTGAAAAAGAATTACGAGTTGAGGGTGGACATGGAGGACTTTGACGGACAGAAAGCCTACGCTTTCTACTCCTCCTTCGCCATCTCTCCCAAAGTCACAGATCCTGAACTGGATGGCTACAAACTCCAGGTTACTGGCTTTAAAGACGGAGGAGCAGGGGACTCTCTCACCTATCACAGCGGTATGAAGTTCTCCACCTTCGACCGAGACCAGGAAATCAACTGTGCAGTCAACGCGGTCGGAGGTTACTGGTACAACGAGTGTTACTTCTCAAACCCAAACGGTCTTTATACATGGGGATTGAACTCACAGATTGGAGTCAACTGGAGGGGATGGAAGACCTTCTACTCTGTGAAAGCCATATCCATGAAGATTAGGCCTGTGAACCTGTGAAGGTCCTTCACAAAGTCCTTTAGTTAAAACATGGTTATATGAACTGCagaataatggctggaacagagcgaatggaatggcatcaaacacatggcatTAAAACGTAAACCACTTTTGATGCATTTGATACTACTCCAGCTATTACGCTACATACAGTCagtaccacgagcccgtcctccgcAATTACGGTGCCATCAACCTCCTGTGCCTCTCACTCACCTGTGGTTCGGAATAAATTGACCACCCCAT

Function

NR:

description
microfibril-associated glycoprotein 4-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036956732.1 False 741 mRNA 0.47 5 7873615 7877834
XM_036956731.1 True 1113 mRNA 0.48 5 7873615 7878590

Neighbor

gene id symbol gene type direction distance location
LOC110510398 LOC106591976 coding upstream 43700 7800666 ~ 7829915 (+)
LOC118942850 NA coding upstream 67935 7803280 ~ 7805680 (+)
LOC118942991 NA coding upstream 298857 7561344 ~ 7574758 (+)
LOC118942849 arhgap8 coding upstream 311640 7527527 ~ 7561975 (+)
LOC118942844 large1 coding upstream 993885 6712920 ~ 6879730 (+)
LOC118942851 NA coding downstream 3659 7882249 ~ 7883321 (+)
yt6j yt6j coding downstream 46426 7925016 ~ 7943584 (+)
LOC118942853 LOC106593275 coding downstream 124825 8003415 ~ 8009468 (+)
LOC118943012 NA coding downstream 125701 8004291 ~ 8004425 (+)
LOC118942992 NA coding downstream 249895 8128485 ~ 8132838 (+)
G1704652 NA non-coding upstream 21318 7850911 ~ 7852297 (+)
G1704650 NA non-coding upstream 26921 7846485 ~ 7846694 (+)
G1704636 NA non-coding upstream 34272 7837179 ~ 7839343 (+)
G1704634 NA non-coding upstream 38658 7833311 ~ 7834957 (+)
G1704645 NA non-coding upstream 55216 7818029 ~ 7818399 (+)
G1704639 NA non-coding downstream 19684 7898274 ~ 7899551 (+)
G1704659 NA non-coding downstream 49859 7928449 ~ 7928828 (+)
G1704671 NA non-coding downstream 92729 7971319 ~ 7971778 (+)
G1704675 NA non-coding downstream 97176 7975766 ~ 7976717 (+)
G1704651 NA other upstream 23495 7849560 ~ 7850120 (+)
G1704562 NA other upstream 215746 7657429 ~ 7657869 (+)
G1704409 NA other upstream 723622 7149400 ~ 7149993 (+)
G1704232 NA other upstream 865875 7007169 ~ 7007740 (+)
LOC118942994 LOC106591951 other downstream 660338 8538928 ~ 8564807 (+)
G1705229 NA other downstream 971808 8850398 ~ 8851107 (+)
eps8a LOC106594571 other downstream 1029926 8908286 ~ 9091490 (+)
G1705267 NA other downstream 1096714 8975304 ~ 8976565 (+)
G1705279 NA other downstream 1133336 9011926 ~ 9013163 (+)

Expression


Co-expression Network