LOC118943012


Basic Information

Item Value
gene id LOC118943012
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 8004291 ~ 8004425 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005038749.1
AATGCACCCTAACCCAAAGGCCATATCAAATAAATGGTATGATCTTGTCAGGTGTGCTAAAATCAACACGATGTACCTTGTCGCCTTTCTCTGATGCTGATGTGCCGTTGAAAGTGAATCCAAGGTTCAACATTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005038749.1 True 135 mRNA 0.41 1 8004291 8004425

Neighbor

gene id symbol gene type direction distance location
yt6j yt6j coding upstream 60707 7925016 ~ 7943584 (+)
LOC118942851 NA coding upstream 120970 7882249 ~ 7883321 (+)
LOC118936573 LOC105026518 coding upstream 125701 7873615 ~ 7878590 (+)
LOC110510398 LOC106591976 coding upstream 174376 7800666 ~ 7829915 (+)
LOC118942992 NA coding downstream 124060 8128485 ~ 8132838 (+)
LOC118942854 NA coding downstream 520531 8524956 ~ 8532810 (+)
LOC118942994 LOC106591951 coding downstream 550016 8538928 ~ 8564807 (+)
LOC110512606 lrp6 coding downstream 564965 8569390 ~ 8669398 (+)
LOC118936349 tbk1 coding downstream 680494 8684919 ~ 8744666 (+)
G1704683 NA non-coding upstream 15838 7988211 ~ 7988453 (+)
G1704675 NA non-coding upstream 27574 7975766 ~ 7976717 (+)
G1704671 NA non-coding upstream 32513 7971319 ~ 7971778 (+)
G1704659 NA non-coding upstream 75463 7928449 ~ 7928828 (+)
G1704945 NA non-coding downstream 5723 8010148 ~ 8010428 (+)
G1704946 NA non-coding downstream 7199 8011624 ~ 8012083 (+)
G1704950 NA non-coding downstream 13756 8018181 ~ 8018431 (+)
G1704956 NA non-coding downstream 20598 8025023 ~ 8025554 (+)
G1704965 NA non-coding downstream 57226 8061651 ~ 8062031 (+)
G1704651 NA other upstream 154171 7849560 ~ 7850120 (+)
G1704562 NA other upstream 346422 7657429 ~ 7657869 (+)
LOC118942849 arhgap8 other upstream 458447 7527527 ~ 7561975 (+)
G1704409 NA other upstream 854298 7149400 ~ 7149993 (+)
G1704232 NA other upstream 996551 7007169 ~ 7007740 (+)
G1705229 NA other downstream 845973 8850398 ~ 8851107 (+)
eps8a LOC106594571 other downstream 904091 8908286 ~ 9091490 (+)
G1705267 NA other downstream 970879 8975304 ~ 8976565 (+)
G1705279 NA other downstream 1007501 9011926 ~ 9013163 (+)

Expression


Co-expression Network