LOC118942992


Basic Information

Item Value
gene id LOC118942992
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 8128485 ~ 8132838 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036958455.1
ATGATTGTCACAACGCGGCTCAGCTCACAACCGGACACCTGTACAGAACCGGACCCCTGTACAGAACTAGACCCCTGTACAGAACCGGACCCCTGTACAGAACTGGACCCCTGTACAGAACCAGACCCCTGTACAGAACTAGACCCCTGTACAGAACCGGACCCCTGTACAGAACTGGACCCCTGTACAGAACCGGACCCCTGTACAGAACCAGACCCCTGTACAGAACCAGACCCCTGTACAGAACTGGACCCCTGTACAGAACCGGACCCCTGTACAGAACTGGACCCCTGTACAGAACCGGACCCCTGTACAGATCCAGACCCCTGTACAGAACTAGACCCCTGTACAGAACCAGACCCCTGTACAGAACTAGACCCCTGTACAGAACCAGACCCCTGTACAGAACTGGACCCCTGTACAGAACTGGACCCCTGTACAGAACTAGATCCCTGTACAGAACTGGACCCCTGTACAGAACTAGACCCCTGTACAGAACTGGACCCCTGTACAGAACTGGACCCCTGTACAGAACTAGACCCCTGTACAGAACTGGACCCCTGTACAGAACTGGACCCCTCTACACCCTCTCCgagccaccacccccccccccagctataCCCTCTCCGAGCCACCACCCCCCCATCCCCCAGCTATACCCTCTCCGAGccaccaccccccctcccccagcttCACCCTCTACGAGccaccaccccccctcccccagctacACCCTCTCCGAGccaccaccccccctcccccagctacACCCTCTCCgagccaccacccccccccccccagctataCCCTCTCCGAGccaccaccccccctcccccagctacACCCTCTCCGAGCCACCACCCCCCCATCCCCCAGCTATACCCTCTCCGAGCCACCACCCCCCCTCCACCAGCTACACCCTCTCCGAGccaccacccccccctcccccagctacACCCTCTCCGAGccaccacccccccctcccccagctacACCCTCTCCgagccacccccccccctcccccagctacACCCTCTCCGAgccaccccacccctcccccagCTACACCCTCTCcgagccaccccccccccccctcccccagctacACCCTCTCCGAGccaccacccccctcccccagctACACCCTCTCCGAGccaccaccccccctcccccagctacACCCTCTCCgagccacccccccccctcccccagctacACCCTCTCCGAGccaccacccccccctcccccagctacACCCTCTCCGAGccaccaccccccctcccccagctacACCCTCTCCGAGccaccaccccccctcccccagctacACCCTCTCCGAGccaccaccccccctcccccagctacACCCTCTCCGagccaccccccccctcccccagctacACCCTCTCCgagccaccacccccccccctcccccagctacACCCTCTCCGAGccaccaccccccctcccccagctacACCCTCTCCGAGccaccaccccccccctcccgcaGCTACACCCTCTCTGAGccaccaccccccctcccccagctacACCCTCTCTGAGccaccacccccctcccccagctACACCCTCTCCGAGccaccacccccctcccccagctACACCCTCTCCGAGccaccacccccccctcccccagctacACCCTCTCCGAGccaccaccccccctcccccagctacACCCTCTCCGAGCCACCACCCCCTCCCCCAGCTACACCCTCTCCGagccacccccccctcccccagctacACCCTCTCCGAGccaccacccccctcccccagctATACCCTCTCCGagccaccccccccctcccccagctacACCCTCTCCGagccaccccccctcccccagctaTACCCTCTCCGagccaccccccccctcccccagctacACCCTCTCCGAACCACCGCTACACCCTCTCCGagccaccccccctcccccagctacACCCTCTCCGAGccaccaccccccctcccccagctacACCCTCTCCGAGCCACCACCCCCCATCCCCCAGCTACACCCTCTCCGAGCCACCACCCCCCATCCCCCAGCTACACCCTCTCCGAGccaccaccccccctcccccagctacACCCTCTCCGAGCCACCACCCCCCATCCCCCAGCTACACCCTCTCCGAGCCACCACCCCCCATCCCCCAGCTACACCCTCTCCGAGCCACCACCCCCCATCCCCCAGCTACACCCTCTCCGAGccaccaccccccctcccccagctacACCCTCTCTGAGccaccaccccccctcccccagctacACCCTCTCCGAGCCACCACCCCCCGTCCCCCAGCTACACCCTCTCCGAGccaccacccccccctcccccagctacACCCTCTCCGagccacccccccctcccccagctacACCCTCtccgagcccccccccccccagctacaCCCTCTCCGAGccaccacccccctcccccagctACACCTTCTCCGAGccaccacccccctcccccagctACACCCTCTCCGAGccaccaccccccctcccccagctacACCCTCTCCGAGCCACCACCCCCCATCCCCCAGCTACACCCTCTCCGAGCCACCACCCCCCATCCCCCAGCTACACCCTCTCCGAGccaccaccccccctcccccagctacACCCTCTCCGAGCCACCACCCCCCCATCCCCCAGCTACACCCTCTCCGAGCGAGTGTTTATCATGTTAGTGTTTAA

Function

NR:

description
PREDICTED: MAP7 domain-containing protein 1-like isoform X4

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036958455.1 True 2739 mRNA 0.68 3 8128485 8132838

Neighbor

gene id symbol gene type direction distance location
LOC118942853 LOC106593275 coding upstream 119017 8003415 ~ 8009468 (+)
LOC118943012 NA coding upstream 124060 8004291 ~ 8004425 (+)
yt6j yt6j coding upstream 184901 7925016 ~ 7943584 (+)
LOC118942851 NA coding upstream 245164 7882249 ~ 7883321 (+)
LOC118936573 LOC105026518 coding upstream 249895 7873615 ~ 7878590 (+)
LOC118942854 NA coding downstream 392118 8524956 ~ 8532810 (+)
LOC118942994 LOC106591951 coding downstream 421603 8538928 ~ 8564807 (+)
LOC110512606 lrp6 coding downstream 436552 8569390 ~ 8669398 (+)
LOC118936349 tbk1 coding downstream 552081 8684919 ~ 8744666 (+)
LOC118942855 gpr19 coding downstream 638049 8770887 ~ 8791070 (+)
G1704996 NA non-coding upstream 28209 8099845 ~ 8100276 (+)
G1704966 NA non-coding upstream 59026 8069196 ~ 8069459 (+)
G1704965 NA non-coding upstream 66454 8061651 ~ 8062031 (+)
G1704956 NA non-coding upstream 102931 8025023 ~ 8025554 (+)
G1704950 NA non-coding upstream 110054 8018181 ~ 8018431 (+)
G1705020 NA non-coding downstream 13417 8146255 ~ 8146467 (+)
G1705023 NA non-coding downstream 16613 8149451 ~ 8149669 (+)
G1705031 NA non-coding downstream 30723 8163561 ~ 8164117 (+)
G1705034 NA non-coding downstream 50067 8182905 ~ 8183281 (+)
G1705035 NA non-coding downstream 52723 8185561 ~ 8185903 (+)
G1704651 NA other upstream 278365 7849560 ~ 7850120 (+)
G1704562 NA other upstream 470616 7657429 ~ 7657869 (+)
LOC118942849 arhgap8 other upstream 582641 7527527 ~ 7561975 (+)
G1704409 NA other upstream 978492 7149400 ~ 7149993 (+)
G1704232 NA other upstream 1120745 7007169 ~ 7007740 (+)
G1705229 NA other downstream 717560 8850398 ~ 8851107 (+)
eps8a LOC106594571 other downstream 775678 8908286 ~ 9091490 (+)
G1705267 NA other downstream 842466 8975304 ~ 8976565 (+)
G1705279 NA other downstream 879088 9011926 ~ 9013163 (+)

Expression


Co-expression Network