LOC118942854


Basic Information

Item Value
gene id LOC118942854
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 8524956 ~ 8532810 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036956764.1
GTGGTCTCTTCCAGCCAATGAGAAGTTAGCCCGGAACTCTCCTAACGCCTCTCATATTACAGCAGAAAGCATGGGGAAGACTGGAACACCGGGTGGAAAGATCAACAGACCCAAAACAGAGCTTGGCAAGAAGCTCTATAAGCGGCGGAGGAATCTGACCcgtgagaagaggaggagacacatCAAGGTGGGAGCTGTGGTGGACGAAGGACtcaccaccatccaccatctcagGAAGAGAAACTCCAGCCCCAGAGCCAACATCACTCTGTCTGGGAAGAAGAAACGCAAGCTGCTCAAACAGCTGCAACACATGAAAGCAGAGAAGGCCGCTATGGAAGttGAGGCAGCAACAAACAAGACGAAGGTGGCAGCAGCACCAAAGAAGGCAGCACCAAAGGCAGCGGCAGCCAGACGCCAGAAAGGGGGTGTGTCCCAGGGGGATGTGGACATGGCAGATATGGAATGAGAAGAGGATGTTCTGTTGGCCCCATGCCAAGGCCAGACCGGGCCCCACATTCAGACCGGGCCCCACATTCAGACCGGGCCCCACATTCAGACCGGGCTCCACATTCAGACCGGGCCCCACATTCAGACCGGGCCCCACATTCAGACCGGGCCCCACATTCAGACCGGGCCCCACATTCAGACCGGGCCCCACATTCAGACCGGGCCCCACATTCAGACCGGGCCCCACATTCAGACCGGGCCCCACATTCAGACCGGGCCCCACATTCAGACCGGGCCCCACATTCAGACCAGGCTCCATATTCAGACCAGGCTCCATATATATGAATATGATTTTATGGACGGGGCCTGATCCTGGATCAGTTTTAGCCTTTTAGACCTAATGAATATGATTACATGGACGGGggagctgatcctggatcagttTTAGCCTTTTAGACCTAATGAATATGATTACATGGACGGGggagctgatcctggatcagttTTAGCCTTTTAGACCTAATGAAtatgattacatggacaggggaggCTGATCCTGGATCAGTTTTAGCCTTTTAGACCTAATGAAtatgattacatggacaggggaggCCTGATCCTGGATCAGTTTTAGCCTTTTAGACCTAATGAAtatgattacatggacaggggaggCTGATCCTGGATCAGTTTTAGCCTTTTAGACCTAATGAATATGATTACATGGACGGGggagctgatcctggatcagttTTAGCCTTTTAGACCTAATGAAtatgattacatggacaggggaggCCTGATCCTGGATCAGTTTTAGCCTTTTAGACCTAATGAAtatgattacatggacaggggaggCCTGATCCTGAGCCAGAGAGCCTTGTGTTTGTGTATCTgaatgccgtcattgtaaataagaatttgttcttaactgacttgcctagtttaaataaaataaaaaacagacagAA

Function

NR:

description
PREDICTED: uncharacterized protein C11orf98 homolog

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036956764.1 True 1424 mRNA 0.50 4 8524956 8532810

Neighbor

gene id symbol gene type direction distance location
LOC118942992 NA coding upstream 392118 8128485 ~ 8132838 (+)
LOC118942853 LOC106593275 coding upstream 515488 8003415 ~ 8009468 (+)
LOC118943012 NA coding upstream 520531 8004291 ~ 8004425 (+)
yt6j yt6j coding upstream 581372 7925016 ~ 7943584 (+)
LOC118942851 NA coding upstream 641635 7882249 ~ 7883321 (+)
LOC118942994 LOC106591951 coding downstream 21631 8538928 ~ 8564807 (+)
LOC110512606 lrp6 coding downstream 36580 8569390 ~ 8669398 (+)
LOC118936349 tbk1 coding downstream 152109 8684919 ~ 8744666 (+)
LOC118942855 gpr19 coding downstream 238077 8770887 ~ 8791070 (+)
LOC118942857 dusp16 coding downstream 286799 8819609 ~ 8898371 (+)
G1705129 NA non-coding upstream 9771 8514577 ~ 8515185 (+)
G1705126 NA non-coding upstream 18527 8505246 ~ 8506429 (+)
G1705125 NA non-coding upstream 20017 8504179 ~ 8504939 (+)
G1705121 NA non-coding upstream 42822 8479641 ~ 8482134 (+)
G1705115 NA non-coding upstream 60533 8445510 ~ 8464423 (+)
G1705142 NA non-coding downstream 12904 8545714 ~ 8547129 (+)
G1705146 NA non-coding downstream 22963 8555773 ~ 8557530 (+)
G1705171 NA non-coding downstream 83795 8616605 ~ 8616891 (+)
G1705177 NA non-coding downstream 142755 8675565 ~ 8675864 (+)
G1704651 NA other upstream 674836 7849560 ~ 7850120 (+)
G1704562 NA other upstream 867087 7657429 ~ 7657869 (+)
LOC118942849 arhgap8 other upstream 979112 7527527 ~ 7561975 (+)
G1704409 NA other upstream 1374963 7149400 ~ 7149993 (+)
G1704232 NA other upstream 1517216 7007169 ~ 7007740 (+)
G1705229 NA other downstream 317588 8850398 ~ 8851107 (+)
eps8a LOC106594571 other downstream 375706 8908286 ~ 9091490 (+)
G1705267 NA other downstream 442494 8975304 ~ 8976565 (+)
G1705279 NA other downstream 479116 9011926 ~ 9013163 (+)

Expression


Co-expression Network