LOC118942860


Basic Information

Item Value
gene id LOC118942860
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 8937143 ~ 8938405 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036956778.1
agagggagagatggagatgagagggagagagggaggtgagagggggagagagggaggtgagaaggAGGTAAACTCCTGACTGATCTGAAGCCAGGCCAGCATATGGTCCAGagccctaccagccctaccagcTCTACCAGCCCAGCATATGGCCCACAGCCCTACCAGCTCTACCAGCCCTACCAGCTCTACCAGCTctaccagccctaccagccctGCATATGGCCCACAAccctaccagccctaccagcTCTACCAGCCCTACCAGCTCTACAGCCCTACCAGATctaccagccctaccagcccaGCATATGGCCCACAGCCATACCAGCCATACCAGCTCTACCAGCTCTACCAGGCCAGCATATGGCCCACAGCCCTACCAGCCCAGCATATGGCCCacagccctaccagccctaccagctctaccagccctaccagcccaGCATATGGCCCACAGCCCTACCAGCCCAGCATATGGTCCACATccctaccagccctaccagcccaGCATATGGCCCACAGCCTTACCAGCCCTACCAGCTctaccagccctaccagcccaGAATATGGTCCACAGCCCTACCAGCTctaccagccctaccagcccaGCATATGGCCCACAGCCCTACCAGCCCAGCTTATGGTCCACATccctaccagccctaccagcccaGCATATGGCCCACAGCCCTGCCAGCTCTACCATCCCTACCAGCTCAGCATATGACCCACAGCCCTACCAGCCCAGCATATGCCCCacagccctaccagccctaccagTCCAGCATATGGCCCACAGCCCAGCATATGGCCCACAGCCCTACAGTCCACTAGAGACAGGTGAGACAGTCCACTAGAGACAGTCCACTAGAGACAGTCCACTAGAGGCAGTCCACTAGAGACAGTCCACTAGAGACAGGTGAGATAGTCCACTAGAGACAGTCCACTAGAGACAGGTGAGACATTCCACTAGAGGCAGTCAACTAGAGACAGTCCACTAGAGACAGTCCACTAGAGACAGGTGTGACAGTCCACTAGAGACAGTCAACTAGAGACAGTCCACTAGAGGCAGTCCACTAGAGACAGTCCACTAGAGACAGTCCACTAGAGACAGTCCACTAGAGACAGTCCACTAGAGGCAGTCCACTAGAGACAGGTGAGACAGTCCACTAGAGACAGTCCACTAGAGACAGGTGAGACAGTCCACTAGAGAC

Function

NR:

description
PREDICTED: leucine-rich repeat extensin-like protein 2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036956778.1 True 1217 mRNA 0.58 2 8937143 8938405

Neighbor

gene id symbol gene type direction distance location
LOC118942856 crbl2 coding downstream 128182 8805889 ~ 8808961 (-)
LOC118942993 NA coding downstream 748756 8187334 ~ 8188387 (-)
pthlha NA coding downstream 890127 8024974 ~ 8047016 (-)
LOC110515713 LOC106609844 coding downstream 934102 7945498 ~ 8003041 (-)
LOC110517214 LOC106599091 coding downstream 1012403 7901712 ~ 7924740 (-)
LOC118942862 NA coding upstream 52326 8990530 ~ 8991221 (-)
LOC118942861 NA coding upstream 147041 9085093 ~ 9090115 (-)
LOC118942864 NA coding upstream 163422 9100061 ~ 9104616 (-)
LOC118942995 NA coding upstream 168503 9106908 ~ 9111439 (-)
LOC110512574 LOC107758139 coding upstream 173308 9111713 ~ 9204676 (-)
G1705513 NA non-coding downstream 48976 8885584 ~ 8888167 (-)
G1705504 NA non-coding downstream 75445 8859100 ~ 8861698 (-)
G1705491 NA non-coding downstream 82415 8852835 ~ 8854728 (-)
G1705485 NA non-coding downstream 142880 8793641 ~ 8794263 (-)
G1705530 NA non-coding upstream 231 8938636 ~ 8938899 (-)
G1705551 NA non-coding upstream 40407 8978812 ~ 8980028 (-)
G1705569 NA non-coding upstream 79526 9017931 ~ 9019653 (-)
G1705581 NA non-coding upstream 100655 9039060 ~ 9039286 (-)
G1705386 NA other downstream 404340 8531735 ~ 8532803 (-)
G1704927 NA other downstream 974903 7941149 ~ 7962240 (-)
LOC118942865 LOC106593190 other upstream 336192 9261999 ~ 9277148 (-)
LOC110515809 LOC106592244 other upstream 530218 9464081 ~ 9480516 (-)
G1705975 NA other upstream 703545 9641950 ~ 9642941 (-)
G1706990 NA other upstream 1422019 10360424 ~ 10360975 (-)

Expression


Co-expression Network