zgc:194209 (LOC106591857)


Basic Information

Item Value
gene id zgc:194209
gene name LOC106591857
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 9217225 ~ 9241339 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036956786.1
TCCCCCAGTCCGTCTCACTCCTCCCCTTCCAGTCTTCTGTCCTCTGGATGAACTCTTTTTAAAATCACTCACTCTcagtccccacacacacacactcactctcagtctctctcagctGAAACAGACTACCTCTCTCCCGCGGCGCTCACCAGAACAGAAAACTACTTTCCTTCATGGCGGCGAGTCTCACCGGAGACAGGATCCAACCGGACTGTGATCTAACCGGACGGGCGCGAGCTGCAGAGGGATTCACTATATTCAAGGGACCCCCTCCGCTCCTGGAGGGCCCGCTGGCTGTCAACACCAGACTACAGAACGGACGCAGGCTGTTCACTGGACAACTGCATGGACCAGAATCCTTCACTGCGGACCCGGAGGGTAACGTGTACACAGGGACGGTGGATGGGAAGCTGTGGAGGATCCATCAGGAGACTCTAACCCTCATCACCCACATGGGACAGGACTTACAGGAGTGTGGTAGCAGGACAGACTATGAGCCAGTCTGTGGTCGTCCTCATGGTGTGCGGTTGGACAGTGGTGGTCAGCTGATCGTAGCGGACTCCTACTTTGGGCTGTTTTCTGTTGACCCCCAGACTGGACACAAGACCCTGCTACTGGACAGCAAGACAGGAGCTGACGGGGTTCCGTTTGCGTTCCTGAACGGGTTGGAGATCTCCTCTCAGACTGGGATCATTTACTTTACAGACTCCTCCTCTCGCTGGGGACGACGACACGTCAAACTAGAGGTGATAGAGACCAACGCTCTGGGTCGACTCCTGACCTTTGACCCCGTGTCAGGGCATGTGGGTGTCCTACTGGATGGTCTCTACATGCCCAATGGCATCGCCCTGTCACCTGACGAGAGCTTCCTGCTGCTGGCCGAAACCAGCATCGGGTGTAtcctcaggTACTGGCTGAAAGGCCCCAAGGCTGGCACCGAGGAGGTCATCATGAACAATATGCCCGGTTACCCTGACAACATCCGCCTTAGCGACCGTGGAACCTTCCTGGTTGGCCTAACGACCACACGCTTCAGGAAGCTCATGCCTCCATTCCTGGACCTGATTGGTCCGTACCCAGCGGTCAAACGCTTTCTGGCTAAGGTGGTTCCTCTGAGCTGGTACAACATGCTGTTGCCTAGATACGGCCTGGTGTTGGAGTTGGACGGGGAAGGGGAGGTGCTGGGGAGTCTCCATGACCCTACAGGCAGCCTGACCTGGGCCGTCAGCGACGTGTTCTCCCACCAGGGGAGACTCTACCTGGGTAGCACCGACCTGCCCTTCCTTCctgtcctggaggactggagctaaCCACTAACTTCTGCTGCAGGCCTCTCATACTAGGCCTGGGGGGGGCTGGGGGGGAGTT
>XM_036956785.1
CCCCAGTCCGTCTCACTCCTCCCCTTCCAGTCTTCTGTCCTCTGGATGAACTCTTTTTAAAATCACTCACTCTcagtccccacacacacacactcactctcagtctctctcagctGAAACAGACTACCTCTCTCCCGCGGCGCTCACCAGAACAGAAAACTACTTTCCTTCATGGCGGCGAGTCTCACCGGAGACAGGATCCAACCGGACTGTGATCTAACCGGACGGGCGCGAGCTGCAGAGGGATTCACTATGCTAGGGAAGAGAGGGATATCAGTGGTCCTGCTATCGGTGGCTGTTGGGGTCTACCTCCTCCCCTCACCCATAAACCCTCAGCCTTACATATTCAAGGGACCCCCTCCGCTCCTGGAGGGCCCGCTGGCTGTCAACACCAGACTACAGAACGGACGCAGGCTGTTCACTGGACAACTGCATGGACCAGAATCCTTCACTGCGGACCCGGAGGGTAACGTGTACACAGGGACGGTGGATGGGAAGCTGTGGAGGATCCATCAGGAGACTCTAACCCTCATCACCCACATGGGACAGGACTTACAGGAGTGTGGTAGCAGGACAGACTATGAGCCAGTCTGTGGTCGTCCTCATGGTGTGCGGTTGGACAGTGGTGGTCAGCTGATCGTAGCGGACTCCTACTTTGGGCTGTTTTCTGTTGACCCCCAGACTGGACACAAGACCCTGCTACTGGACAGCAAGACAGGAGCTGACGGGGTTCCGTTTGCGTTCCTGAACGGGTTGGAGATCTCCTCTCAGACTGGGATCATTTACTTTACAGACTCCTCCTCTCGCTGGGGACGACGACACGTCAAACTAGAGGTGATAGAGACCAACGCTCTGGGTCGACTCCTGACCTTTGACCCCGTGTCAGGGCATGTGGGTGTCCTACTGGATGGTCTCTACATGCCCAATGGCATCGCCCTGTCACCTGACGAGAGCTTCCTGCTGCTGGCCGAAACCAGCATCGGGTGTAtcctcaggTACTGGCTGAAAGGCCCCAAGGCTGGCACCGAGGAGGTCATCATGAACAATATGCCCGGTTACCCTGACAACATCCGCCTTAGCGACCGTGGAACCTTCCTGGTTGGCCTAACGACCACACGCTTCAGGAAGCTCATGCCTCCATTCCTGGACCTGATTGGTCCGTACCCAGCGGTCAAACGCTTTCTGGCTAAGGTGGTTCCTCTGAGCTGGTACAACATGCTGTTGCCTAGATACGGCCTGGTGTTGGAGTTGGACGGGGAAGGGGAGGTGCTGGGGAGTCTCCATGACCCTACAGGCAGCCTGACCTGGGCCGTCAGCGACGTGTTCTCCCACCAGGGGAGACTCTACCTGGGTAGCACCGACCTGCCCTTCCTTCctgtcctggaggactggagctaaCCACTAACTTCTGCTGCAGGCCTCTCATACTAGGCCTGGGGGGGGCTGGGGGGGAGTT

Function

NR:

description
adipocyte plasma membrane-associated protein-like

GO:

id name namespace
GO:0009058 biosynthetic process biological_process
GO:0016844 strictosidine synthase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036956786.1 False 1368 mRNA 0.57 8 9217225 9241339
XM_036956785.1 True 1456 mRNA 0.57 9 9217227 9241339

Neighbor

gene id symbol gene type direction distance location
eps8a LOC106594571 coding upstream 125735 8908286 ~ 9091490 (+)
LOC118942859 NA coding upstream 132667 9082796 ~ 9084558 (+)
LOC118942863 NA coding upstream 190209 9024374 ~ 9027016 (+)
LOC118942857 dusp16 coding upstream 318854 8819609 ~ 8898371 (+)
LOC118942858 LOC106612417 coding upstream 347989 8864331 ~ 8869236 (+)
LOC110507941 LOC106592244 coding downstream 95542 9336881 ~ 9354472 (+)
LOC118943004 LOC106591072 coding downstream 146378 9387717 ~ 9391585 (+)
LOC118936575 LOC106592244 coding downstream 161155 9402494 ~ 9413171 (+)
LOC118942866 LOC106576670 coding downstream 290765 9532104 ~ 9722986 (+)
LOC118942867 NA coding downstream 528251 9769444 ~ 9771487 (+)
G1705340 NA non-coding upstream 14730 9201370 ~ 9202495 (+)
G1705323 NA non-coding upstream 64151 9152170 ~ 9153074 (+)
G1705309 NA non-coding upstream 110737 9102434 ~ 9106488 (+)
G1705305 NA non-coding upstream 121619 9095396 ~ 9095606 (+)
G1705304 NA non-coding upstream 122139 9094713 ~ 9095086 (+)
G1705665 NA non-coding downstream 2420 9243759 ~ 9244263 (+)
G1705666 NA non-coding downstream 3244 9244583 ~ 9245096 (+)
G1705648 NA non-coding downstream 11867 9253206 ~ 9254111 (+)
G1705649 NA non-coding downstream 14890 9256229 ~ 9257527 (+)
G1705646 NA non-coding downstream 18657 9259996 ~ 9260273 (+)
G1705279 NA other upstream 204062 9011926 ~ 9013163 (+)
G1705267 NA other upstream 240660 8975304 ~ 8976565 (+)
G1705229 NA other upstream 366118 8850398 ~ 8851107 (+)
LOC118942994 LOC106591951 other upstream 656013 8538928 ~ 8564807 (+)
G1705918 NA other downstream 413959 9655298 ~ 9655718 (+)
G1705920 NA other downstream 417992 9659331 ~ 9660140 (+)
G1706013 NA other downstream 506846 9748185 ~ 9753473 (+)
G1706090 NA other downstream 674374 9915713 ~ 9918019 (+)
G1706152 NA other downstream 893049 10134388 ~ 10135384 (+)

Expression


Co-expression Network