XLOC_003620 (BX248521.3)


Basic Information

Item Value
gene id XLOC_003620
gene name BX248521.3
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007122.7
NCBI id CM002895.2
chromosome length 45484837
location 36994694 ~ 36994808 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00007048
gtcggcagctagctctctgcaactctcacatggtcgcccactgaagttaagcagggctgcgATTGGTCagaacctggatgggagaccacataggaaagctaggttgctgccggaa

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000112378

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00007048 True 115 rRNA 0.56 1 36994694 36994808

Neighbor

gene id symbol gene type direction distance location
XLOC_003618 parapinopsinb coding upstream 205897 36777613 ~ 36788797 (+)
XLOC_003617 si:ch211-11c3.12 coding upstream 307427 36683859 ~ 36687267 (+)
XLOC_003616 si:ch211-11c3.11 coding upstream 310968 36675599 ~ 36683726 (+)
XLOC_003615 si:ch211-11c3.9 coding upstream 320318 36665359 ~ 36674376 (+)
XLOC_003614 CR457444.3 coding upstream 336055 36657025 ~ 36658639 (+)
XLOC_003621 bicd2 coding downstream 54297 37049105 ~ 37088934 (+)
XLOC_003622 card19 coding downstream 100357 37095165 ~ 37101987 (+)
XLOC_003623 NA coding downstream 141992 37136800 ~ 37170438 (+)
XLOC_003624 itih3b coding downstream 183463 37178271 ~ 37200200 (+)
XLOC_003625 zgc:112265 coding downstream 206675 37201483 ~ 37229533 (+)
XLOC_003369 CR854846.2 misc upstream 20871612 16122786 ~ 16123082 (+)
XLOC_003318 CR450764.6 misc upstream 24282698 12711700 ~ 12711996 (+)
XLOC_003317 CR450764.16 misc upstream 24300431 12693967 ~ 12694263 (+)
XLOC_003316 CR450764.11 misc upstream 24309095 12685304 ~ 12685599 (+)
XLOC_003315 CR450764.18 misc upstream 24314666 12679732 ~ 12680028 (+)
XLOC_003613 CR457444.4 non-coding upstream 337929 36653213 ~ 36656765 (+)
XLOC_003611 CR457444.6 non-coding upstream 353839 36600242 ~ 36640855 (+)
XLOC_003612 CR457444.10 non-coding upstream 381530 36612354 ~ 36613164 (+)
XLOC_003610 CR457444.12 non-coding upstream 404206 36587329 ~ 36590488 (+)
XLOC_003626 CABZ01065569.1 non-coding downstream 219300 37214108 ~ 37214223 (+)
XLOC_003628 CR936337.1 non-coding downstream 369638 37364446 ~ 37364560 (+)
XLOC_003634 NA non-coding downstream 846449 37841257 ~ 37848711 (+)
XLOC_003636 NA non-coding downstream 1000258 37995066 ~ 38000612 (+)

Expression


Co-expression Network