LOC110510616


Basic Information

Item Value
gene id LOC110510616
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 10794769 ~ 10796991 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005038526.1
atggggtattgtgtgtagattgctgaggaattgttttaaaaaaaatctattttagagtaaggctgtaatgtgacaaaatgtggaaaaagtcaaggggtctgaatactttccgaaggcaccgtcACATTGCCTAAATAGCAAGTATCACACTTGATTTTTCTAAAGGTAAAATTTCTATACAGATTTTTATTAAGATGAGTAACTTTCTACAGCTCTTTTATTTTGGTTCTGTTCAGGCTGATGTGTGTCCAGATGGACATTGGTTCTGTTCAGGTTGATGTGTGTCCAGATGGACATTGGTTCTGTTCAGGCTGATGTGTGTCCAGATGGACATTGGTTCTGTTCAGGCTGATGTGTGTCCAGATGGACATTGGTTCTGTTCAGGCTGATGTGTGTCCAGATGGACATTGGTTCTGTTCAGGCTGATGTGTGTCCAGATGGACATTGGTTTTGTTCAGGCTGATGTGTGTCCAGATGGACATTGGTTCTGTTCATGCTGATGTGTGTCCAGATGGACATTGGTTCTGTTCATGCTGATGTGTGTCCAGATGGACATTGGTTCTGTTCAGGCTGATGTGTGTCCAGATGGACATTGGTTCTGTTCAGGCTGATGTGTGTCCAGATGGACATTGGTTCTGTTCAGGCTGATGTGTGTCCAGATGGACATTGGTTCTGTTCAGGCTGATGTGTGTCCAGATGGACATTGGTTTTGTTCAGGCTGATGTGTGTCCAGATGGACATTGGTTCTGTTCATGCTGATGTGTGTCCAGATGGACATTGGTTCTGTTCATGCTGATGTGTGTCCAGATGGACATTGGTTCTGTTCAGGTTGATGTGTATCCAGATAGACATTGGTTCTGTTCAGGCTGATGTGTATCCAGATAGACATTGGTTCTGTTCAGGCTGATTGCTGATGTGTATCCAGACAGACATTGGTTCTGTTCAGGCTGATGTGTGTCCAGATGGACATTGGTTCTGTTCAGGCTGATTGCTGATGTGTCCAGATGGACATTGGTTCTGTTCAGGTTGATGTGTGTCCAGATAGACATTGGTTCTGTTCAGGTTGATGTGTGTCCAGATAGACATTGGTTCTGTTCAGGTTGATGTGTGTCCAGATAGACATTGGTTCTGTTCAGGCTGATTGCTGATGTGTATCCAGACAGACATTGGTTCTGTTCAGGCTGATGTGTGTCCAGATGGACATTGGTTCTGTTCAGGCTGATTGCTGATGTGTGTCCAGATAGACATTGGTTCTGTTCAGGTTGATGTGTGTCCAGATAGACATTGGTTCTGTTCAGGTTGATGTGTGTCCAGATGGACATTGGTTCTGTTCAGGCTGATTGCTGATGTGTGTCCAGATGGACATTGGTTCTGTTCAGGCTGATGTGTGTCCAGACAGACATTATTTACATGTCAGTTTATTTCAATGATGATTCCCATCAAGAGATACTACGATCTCTTGTTTTGATCGAGTGTCTCTACAAGGGGTGGTATGTATGAAGACATGTAACATATATGAAATATGTTTTAAGTGAAGAAAGTGATTTGCAAGGAATGAATTATGacctgcatcctaaatggcaccatattccctacgtagtgcacttcttttgaacaggacccatagggcactggttaaaagtagtgcactatatagggaataggtattGGTACACAGCCATGATGAAATGTAGGAATCTAAACTGTTGTTTCGCTCATATGATGTACGAAGGAAGAAACTAGAAGTTGAGTGAGTGACACAACAATGTCCATTTTTATTTTCCTTATAAACACCTAGAACTGAGGAAACAGACCAGCTCACTAAAAGTAGTTTTTCTTCTCTTCAACATAAATATGCAGACTTCCTTTTGAAAACGGAATCACAACGCAAAAacgtcaccctattccctacgtagtgcactacttttgaccagggctctggtgcACTAGGGATCAGGATGGCAGACAGGTTCAGAGTCATTTTCTAAAGACATTTTTTCAGACTCAAGTGACTGTCTTTTCTCTCGCAACCACAAAACAcgaggaacaacaacaacaacaaaggaaaAGATGAGGCAACACCATGTTTTCTTTAAAGCATTTCCAATAATATGAAACCcaaacagttattttgtgttAATAATACAGCTTTATCCAGCAAATAAAAAGCACTTTGGTCATCTTCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005038526.1 True 2186 mRNA 0.42 2 10794769 10796991

Neighbor

gene id symbol gene type direction distance location
LOC110514895 LOC106576365 coding upstream 2958 10730550 ~ 10791811 (+)
LOC110490805 LOC106591178 coding upstream 96155 10522946 ~ 10699071 (+)
LOC118942873 NA coding upstream 192349 10600988 ~ 10602420 (+)
LOC110510583 LOC106597972 coding upstream 471665 10321192 ~ 10323104 (+)
LOC118942996 NA coding upstream 696745 10070476 ~ 10098024 (+)
LOC118942874 LOC106609820 coding downstream 103858 10900849 ~ 10902569 (+)
LOC110531908 LOC106594049 coding downstream 306189 11103180 ~ 11138813 (+)
LOC118942875 NA coding downstream 315221 11112212 ~ 11112675 (+)
LOC118942876 fgl2 coding downstream 397554 11194545 ~ 11200949 (+)
LOC110499797 LOC106596128 coding downstream 514199 11311190 ~ 11316722 (+)
G1706404 NA non-coding upstream 1656 10792106 ~ 10793113 (+)
G1706437 NA non-coding upstream 6370 10787642 ~ 10788399 (+)
G1706436 NA non-coding upstream 9489 10783060 ~ 10785280 (+)
G1706429 NA non-coding upstream 28069 10766412 ~ 10766700 (+)
G1706428 NA non-coding upstream 30894 10762824 ~ 10763875 (+)
G1706443 NA non-coding downstream 15778 10812769 ~ 10813262 (+)
G1706447 NA non-coding downstream 19292 10816283 ~ 10817733 (+)
G1706491 NA non-coding downstream 101027 10898018 ~ 10899271 (+)
G1706454 NA non-coding downstream 106864 10903855 ~ 10905995 (+)
G1706496 NA non-coding downstream 115022 10912013 ~ 10926463 (+)
G1706152 NA other upstream 659385 10134388 ~ 10135384 (+)
G1706090 NA other upstream 876750 9915713 ~ 9918019 (+)
G1706013 NA other upstream 1041296 9748185 ~ 9753473 (+)
G1705920 NA other upstream 1134629 9659331 ~ 9660140 (+)
G1705918 NA other upstream 1139051 9655298 ~ 9655718 (+)
G1706652 NA other downstream 473738 11270729 ~ 11272473 (+)
G1706711 NA other downstream 601049 11398040 ~ 11399288 (+)
G1707493 LOC106609754 other downstream 771438 11568429 ~ 11568956 (+)
G1707462 NA other downstream 856910 11653901 ~ 11654623 (+)

Expression


Co-expression Network