LOC118942874 (LOC106609820)


Basic Information

Item Value
gene id LOC118942874
gene name LOC106609820
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 10900849 ~ 10902569 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036956853.1
ACCAATAGGTATTTATGTTGGGCGGGATCTTACCTTGCGTGCAAGTAAAGGGAAAAAATCAGAAATCAGCCGTTCAAACTAGCTAATATTTACGAACGGTCATGTAGCTAATATTGATGATGGATTATCGAAAATTATTTAACGGTGGATACGGAGACAGAAACTCTGATCATCACTAAACACAACATCAGGGACCGGCAACCTCTATTTCCACTGTAGGGGTACTACCAGTGTACCTGTGGGGCCACCATGTCTCTTGCTCAGAGAGTCCTCCTCACCTGGATCTTCACCCTGGCCTTCCTCATCATGCTCGTCCTCAAACTAGATGGCAAAGTCCACTGGAACTGGTTCCTCACCTTTCTACCCGTATGGATCTTCGACGGCATCCTCCTCCTCATGTTACTCGTCAAGATGGTCGCCAGGTGTAAAGCGGGACACGACCCTCGTAACGGCTCCCAGGACCTGAAGAAGAAGGCCTGGTACCTGGCGTCCATGCTGCTGAAGCTGGGCTTCTGTCTGACGCTGTGCGCCCGGCTGGAGAAGCTTACCCATATCAAGCTCACCTTTGTGTGTATTCCTCTGTGGTGCATGTTGCTGGGAGCCATGGTGGAGCTGGGCTATAACATCTTCCCCGAGAGGAGAGAGGCATGAGCGATGGATTGAGGAGAATGGAAAGGAGGAGGCTCTTCAGAGAAGGCTGGAAGGAACACACACAAACCTAATTCTTTAGTGTGGTTATTTCAGCTGTTTGCGAAATCACAAACTCTCCTTCATTTGTTATGACATGAAGTGTTATCCCGTTGACCAAGCTTTGCTCTCGTGCCAACAGTACTGCTTATCAGAGAACAGATCAGAGACTGTGCCTTCAGGAGGTTATAAAACGGATGTAAATGGTACAGGTCATGTAGATGTCAGATAAACTAATACAATCTAGCAAAGACATGTCACATTGCTAGCTAAGGATTTCCAGACATTTTCCTTGACGTCAGCATCTTTTGTGTTGTAAAATCTTTCATACTTTGTGGAACGACAAATGATTGTCGTAGTGTTTGGAAGACGGGGCTCTTCCTATGTAAAGCCATTCAGTTTAAATGTGATCTACCTGTAGTGTTTGGAAGATGGGGCTCTTCCTATGTAAAGCCATTCAGTGTTTTGTGCCATTCAGTTAAAATGTGATCTACCTGTAGTGGTACTGTCTCCATTTAATTTTCACCATTTGAATAGTTGATTTTGACATCAATCTgcatattatttattattttcctTTCAGTATTGTGTGAATAAATGGATGTCACTGTTCCAAACTAAAA

Function

NR:

description
PREDICTED: transmembrane protein 60-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036956853.1 True 1310 mRNA 0.44 2 10900849 10902569

Neighbor

gene id symbol gene type direction distance location
LOC110510616 NA coding upstream 103858 10794769 ~ 10796991 (+)
LOC110514895 LOC106576365 coding upstream 109038 10730550 ~ 10791811 (+)
LOC110490805 LOC106591178 coding upstream 202235 10522946 ~ 10699071 (+)
LOC118942873 NA coding upstream 298429 10600988 ~ 10602420 (+)
LOC110510583 LOC106597972 coding upstream 577745 10321192 ~ 10323104 (+)
LOC110531908 LOC106594049 coding downstream 200611 11103180 ~ 11138813 (+)
LOC118942875 NA coding downstream 209643 11112212 ~ 11112675 (+)
LOC118942876 fgl2 coding downstream 291976 11194545 ~ 11200949 (+)
LOC110499797 LOC106596128 coding downstream 408621 11311190 ~ 11316722 (+)
LOC110499792 LOC106595912 coding downstream 439067 11341636 ~ 11354995 (+)
G1706491 NA non-coding upstream 1578 10898018 ~ 10899271 (+)
G1706447 NA non-coding upstream 83116 10816283 ~ 10817733 (+)
G1706443 NA non-coding upstream 87587 10812769 ~ 10813262 (+)
G1706404 NA non-coding upstream 107736 10792106 ~ 10793113 (+)
G1706437 NA non-coding upstream 112450 10787642 ~ 10788399 (+)
G1706454 NA non-coding downstream 1286 10903855 ~ 10905995 (+)
G1706496 NA non-coding downstream 9444 10912013 ~ 10926463 (+)
G1706503 NA non-coding downstream 30174 10932743 ~ 10933825 (+)
G1706521 NA non-coding downstream 77431 10980000 ~ 10980452 (+)
G1706534 NA non-coding downstream 118629 11021198 ~ 11021877 (+)
G1706152 NA other upstream 765465 10134388 ~ 10135384 (+)
G1706090 NA other upstream 982830 9915713 ~ 9918019 (+)
G1706013 NA other upstream 1147376 9748185 ~ 9753473 (+)
G1705920 NA other upstream 1240709 9659331 ~ 9660140 (+)
G1705918 NA other upstream 1245131 9655298 ~ 9655718 (+)
G1706652 NA other downstream 368160 11270729 ~ 11272473 (+)
G1706711 NA other downstream 495471 11398040 ~ 11399288 (+)
G1707493 LOC106609754 other downstream 665860 11568429 ~ 11568956 (+)
G1707462 NA other downstream 751332 11653901 ~ 11654623 (+)

Expression


Co-expression Network