LOC118942877


Basic Information

Item Value
gene id LOC118942877
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 11267383 ~ 11269567 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005038529.1
GTACCAGGAGAGAGCCTTTGATTCTGCAGCAGGTATGACAGTTAGTACCAGGAGAGAGCCTTTGATTCTGCAGCAGGTATGACAGTTAGTACCAGGAGAGAGCCTTTGATTCTGCAGCAGGTATGACAGTTAGTACCAGGAGAGAGCCTTTGATTCTGCAGCAGGTATGACAGTTAGTACCAGGAGAGAGCCTTTGATTCTGCAGCAGGTATGACAGTTAGTACCAGGAGAGAGCCTTTGATTCTGCAGCAGGTATGACAGTTAGTACCAGGAGAGAGCCTTTGATTCTGCAACAGGTATGACAGTTAGTACCAGGAGAGAGCCTTTGATTCTGCAGCAGGTATGACAGTTAGTACCAGGAGAGAGCCTTTGATTCTGCAGCAGGTATGACAGTTAGTACCAGGAGAGAGCCTTTGATTCTGCAGCAGGTATGACAGTTAGTACCAGGAGAGAGCCTTTGATTCTGCAGCAGGTATGACAGTTAGTACCAGGAGAGAGCCTTTGATTCTGCAACAGGTATGACAGTTAGTACCAGGAGAGAGCCTTTGATTCTGCAGCAGGTATGACAGTTAGTACCAGGAGAGAGCCTTTGATTCTGCAACAGGTATGACAGTTAGTACCAGGAGAGAGCCTTTGATTCTGCAACAGGTATGACAGTTAGTACCAGGAGAGAGCCTTTGATTCTGCAACAGGTATGACAGTTAGTACCAGGAGAGAGCCTTTGATTCTGCAGCAGGTATGACAGTTAGTACCAGGAGAGAGCCTTTGATTCTGCAGCAGGTATGACAGTTAGTACCAGGAGAGAGCCTTTGATTCTGCAGCAGGTATGACAGTTAGTACCAGGAGAGAGCCTTTGATTCTGCAGCAGGTATGACAGTTAGTACCAGGAGAGAGCCTTTGATTCTGCAGCAGGTATGACAGTTAGTACCAGGAGAGAGCCTTTGATTCTGCAGCAGGTATGACAGTTAGTACCAGGAGAGAGCCTTTGATTCTGCAGCAGGTATGACAGTTAGTACCAGGAGAGAGCCTTTGATTCTGCAGCAGGTATGACAGTTAGTACCAGGAGAGAGCCTTTGATTCTGCAGCAGGTATGACAGTTAGTACCAGGAGAGAGCCTTTGATTCTGCAGCAGGTATGACAGTTAGTACCAGGAGAGAGCCTTTGATTCTGCAACAGGTATGACAGTTAGTACCAGGAGAGAGCCTTTGATTCTGCAGCAGGTATGACAGTTAGTACCAGGAGAGAGCCTTTGATTCTGCAACAGGTATGACAGTTAGTACCAGGAGAGAGCCTTTGATTCTGCAACAGGTATGACAGTTAGTACCAGGAGAGAGCCTTTGATTCTGCAACAGGTATGACAGTTAGTACCAGGAGAGAGCCTTTGATTCTGCAGCAGGTATGACAGTTAGTACCAGGAGAGAGCCTTTGATTCTGCAGCAGGTATGACAGTTAGTACCAGGAGAGAGCCTTTGATTCTGCAGCAGGTATGACAGTTAGTACCAGGAGAGAGCCTTTGATTCTGCAGCAGGTATGACAGTTAGTACCAGGAGAGAGCCTTTGATTCTGCAGCAGGTATGACAGTTAGTACCAGGAGAGAGCCTTTGATTCTGCAGCAGGTATGACAGTTAGTACCAGGAGAGAGCCTTTGATTCTGCAGCAGGTATGACAGTTAGTACCAGGAGAGAGCCTTTGATTCTGCAGCAGGTATGACAGTTAGTACCAGGAGAGAGCCTTTGATTCTGCAGCAGGTATGACAGTTAGTACCAGGAGAGAGCCTTTGATTCTGCAGCAGGTATGACAGTTAGTACCAGGAGAGAGCCTTTGATTCTGCAGCAGGTATGACAGTTAGTACCAGGAGAGAGCCTTTGATTCTGCAGCAGGTATGACAGTTAGTACCAGGAGAGAGCCTTTGATTCTGCAGCAGGTATGACAGTTAGTACCAGGAGAGAGCCTTTGATTCTGCAGCAGGTATGACAGTTAGTACCAGGAGAGAGCCTTTGATTCTGCAGCAGGTATGACAGTTAGTACCAGGAGAGAGCTACTGGTACTAACTGCTTTCAGCCTTACCAATGTATACTGCAATGTCCCTTGGTGGGATGAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005038529.1 True 2105 mRNA 0.47 3 11267383 11269567

Neighbor

gene id symbol gene type direction distance location
LOC110531893 LOC105024883 coding downstream 31851 11214204 ~ 11235532 (-)
LOC110531911 LOC106577472 coding downstream 60311 11139647 ~ 11207072 (-)
LOC110518048 LOC106576476 coding downstream 180914 10903853 ~ 11086469 (-)
LOC110499727 LOC106609821 coding downstream 370028 10796557 ~ 10897355 (-)
LOC118942872 LOC106609835 coding downstream 776311 10406178 ~ 10491072 (-)
LOC110515612 LOC106592662 coding upstream 3850 11273417 ~ 11284152 (-)
LOC110515610 tsn8 coding upstream 18677 11288244 ~ 11304066 (-)
LOC110499803 LOC106609751 coding upstream 57706 11327273 ~ 11335783 (-)
tymp typh coding upstream 97148 11366715 ~ 11370357 (-)
LOC118942879 typh coding upstream 110032 11379599 ~ 11383369 (-)
G1707374 NA non-coding downstream 7571 11259079 ~ 11259812 (-)
G1707359 NA non-coding downstream 37053 11228597 ~ 11230330 (-)
G1707341 NA non-coding downstream 87562 11177667 ~ 11179821 (-)
G1707326 NA non-coding downstream 145559 11120567 ~ 11121824 (-)
G1707384 NA non-coding upstream 8098 11277665 ~ 11277884 (-)
G1707387 NA non-coding upstream 15274 11284841 ~ 11285045 (-)
G1707391 NA non-coding upstream 27830 11297397 ~ 11297769 (-)
G1707395 LOC106596128 non-coding upstream 41708 11311275 ~ 11313725 (-)
G1707396 LOC106596128 non-coding upstream 44186 11313753 ~ 11315006 (-)
G1707317 NA other downstream 133593 11130215 ~ 11133790 (-)
G1707276 NA other downstream 246345 11019026 ~ 11021038 (-)
G1707366 NA other upstream 112095 11363157 ~ 11397594 (-)
LOC118942880 LOC105024872 other upstream 345743 11615310 ~ 11628453 (-)
prickle1b LOC106576510 other upstream 671562 11933307 ~ 11954482 (-)
LOC110499744 LOC106609792 other upstream 851209 12119840 ~ 12125727 (-)

Expression


Co-expression Network