LOC118943005 (LOC106592567)


Basic Information

Item Value
gene id LOC118943005
gene name LOC106592567
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 12368869 ~ 12384112 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036958473.1
ATGTCCAGGAACAACATCAAACAAGtgtGGGCTCTGCTCATGGTGTTGCTGTGTGTGGAGCTGCGTGGCAGTGGCAGCGCGAGCGCGGCACCCATCTGTGTCCACGGCCAGGCGGGGTGCCACTTCCTCTCCCTGGCAGACCTCTTTGACCGGGTCATCCAGCACAGTGCCAGGATGCACAGCATCTCCAGTGACCTGCACTCTGAATTTGAGCAATATGTTCTGCCAAGCAGAAATCATATTGGCAGGATAAACCGCCACTGCCATACAGCCACCATACTAACCCCTAATGGCAAAGAGAACGCGCAGAGACTGGCTagagAGGAGTTAACGGAGGTGATTCTGAAGCTGCTGGTAGCATGGAAGGATCCTCTGTGGCAGTTCCACCAGAACATGGTTCACCAGGATGACTTCAACAACTTCAGCTCCAACAAAGCACTGGAGATGAGCTACATGGTGCACGAGCTCCGCAAGGGAGTCGAGAAGGTGGCTGATAAGatgCAGCACCTGGGGATGATCAGTAACACCCTGAGTGGCCTGTCCTCCCCTGAGGCCTTGGACCCCTCATCAGACACCTGAGGAGAGTCCCAGGCCATGAGCGACCACGACCTACTCTACTGCTTCAGACGGGACTCCAACAAGGTCCAGAACTACCTGAAGATCCTCAAGTGCAGGATCGTACCTGAGAACGGATGCTGAGATGTGAAGACAAGAGAAGAGGCGTGACATTCACAAGCTACCGTGTCAATCAAGGAAATCAAGGACACATCATGAATAGACACGATGATAAGACCGAGAGAAGAGACTGGGACTGTGGCACTTTCCTCCTCCTAACAAGTCCAACGATAACTTCCACCAGCGACAATGTCTTAATGTCTTCTATGTACTGTATTTATGTCATGTCACAGAGAAATAtagtacagatgtaagatcttaatctgatc

Function

NR:

description
PREDICTED: prolactin-like

GO:

id name namespace
GO:0005576 extracellular region cellular_component
GO:0005179 hormone activity molecular_function

KEGG:

id description
K05439 PRL; prolactin

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036958473.1 True 944 mRNA 0.51 5 12368869 12384112

Neighbor

gene id symbol gene type direction distance location
pphln1 LOC106593546 coding upstream 437616 11890730 ~ 11931253 (+)
LOC110515322 LOC106576579 coding upstream 571274 11724426 ~ 11797595 (+)
cntn1b LOC106593403 coding upstream 708318 11630432 ~ 11660551 (+)
nrcama LOC105024872 coding upstream 744658 11479780 ~ 11624211 (+)
LOC110503752 LOC106576575 coding upstream 900223 11432284 ~ 11468646 (+)
LOC118942882 LOC106609674 coding downstream 7517 12391629 ~ 12421266 (+)
LOC110490813 LOC106576520 coding downstream 13688 12397800 ~ 12401053 (+)
LOC118936492 LOC106609674 coding downstream 24441 12408553 ~ 12415265 (+)
LOC110490708 LOC106576521 coding downstream 33324 12417436 ~ 12419416 (+)
LOC110490703 LOC106594938 coding downstream 37521 12421633 ~ 12448308 (+)
G1708165 NA non-coding upstream 3358 12361470 ~ 12365511 (+)
G1708160 NA non-coding upstream 13056 12355378 ~ 12355813 (+)
G1708135 NA non-coding upstream 26657 12333933 ~ 12342212 (+)
G1707971 NA non-coding upstream 203568 12165035 ~ 12165301 (+)
G1707970 NA non-coding upstream 206999 12161533 ~ 12161870 (+)
G1708247 NA non-coding downstream 72740 12456852 ~ 12457169 (+)
G1708250 NA non-coding downstream 75855 12459967 ~ 12460208 (+)
G1708257 NA non-coding downstream 84278 12468390 ~ 12468614 (+)
G1708268 NA non-coding downstream 99830 12483942 ~ 12484305 (+)
G1708014 NA other upstream 118745 12248028 ~ 12250124 (+)
G1707772 LOC106576513 other upstream 504296 11863662 ~ 11864573 (+)
G1707462 NA other upstream 714246 11653901 ~ 11654623 (+)
G1707493 LOC106609754 other upstream 799913 11568429 ~ 11568956 (+)
G1706711 NA other upstream 969581 11398040 ~ 11399288 (+)
G1708323 NA other downstream 194496 12578608 ~ 12584156 (+)
G1708367 NA other downstream 265574 12649686 ~ 12651577 (+)
G1708495 NA other downstream 400095 12784207 ~ 12785502 (+)
LOC110490810 LOC106576597 other downstream 416656 12745000 ~ 12825754 (+)
G1708635 NA other downstream 567573 12951685 ~ 12952515 (+)

Expression


Co-expression Network