LOC118936492 (LOC106609674)


Basic Information

Item Value
gene id LOC118936492
gene name LOC106609674
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 12408553 ~ 12415265 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036956924.1
GAAAGCGGAATATTCGTTGAATATCCTAATTGAAACGGTATTATTATACCGTTTACCCTATTATTTAATGTAACTGTTTCCCCACATGTACTTATCTATTTCCATTATCATTGGTGTGTAGTAAAAACCCCCACCCACATGGGATCGCCACCCGCTGATAAAAACAGAGAAATAATGCGGAAGTAAAACTGGGAGcgggtttgttttgtttgttgccaCCATTCTTTCCTCGTGGACGAAGCCATACTAGCTGAATACCCAACTCTCAGTCCACTGAAACATGTCTAAACTCCAGTCGTTTCGTGTGTTTTTAAATGAGCGTTTAACCGCGGCAGCTGTGGAGATTTTCGGGGCAGTTGAAGAAACGGTAGCGGAGTACCACGATGAGAATGATCGGCTACGGAGACTGCTGTGGATCACACCGGAGATAAAACTATGTAACGTAGactccctgcagctctctctctgtgtctctgaagAGGAGGTTCTCCCTGATCAGCAGCACTGTGAGCAGGAGTGGAGCCCCACTCTGGGGCAAGAGAACCCAGAACTTCcacagattaaagaggaacaggaggaactcaGGACCAGTCTGGAGGCTGATATCATAGAGTTCAAATTCATTCCTTCCTGTGTGAAAAGTGAATGTGATAAGGACCCACTTCAGTCCTTGACTCTTCCCCAAACCCAGAATGTGGAGAACAGAGAGCGTGACCCTAAACAAGTGGAACTCACACCTTTTGTTACTGTGACCCACCTAAAGGGTCTCTACATTCCCTGTGACCCTCAAGATAATCAAAACAATACCTCCAGCCAAAGCTCAACCTTAAGCAGCGACCCAGCGGCACTTGACAGCAGCCCATCGTTGGATCCCAACCCGCCATTGGATCCCAGCCCGCCATTGGATCCCAGCCCGCCATTGGATCCCAGCCCGCCATTGGATCCCAGCCCGCCATTGGATTCCAGTCCGTCATTGGATTCCAGTCCGTCATTGGATCCAAGCCCATCATTGGATCCAAACCAGTCAATGGTGGAACACTGTTTCAAACCCAGCACCACGTCTAGAAAAACTCACCACTGCCATGACTGTGGCGAAATGTTTGCAATGAAAGCTGACCTGCAGAGTCATGTGACTCTTTTAAAGAAGAGGCCCAGTGAATGTCGCTTCTGCAAAAGAAACTACAACTCTACCTGTAAACTAAAGGCCCATATCCGACTCTGTCACAGTGGGAAACCCTACACCTGCCCTGTTTGTGGCAAGACCTTCAAACTCAAAGGGAATCTGTCCAAGCACATAAGGATTCACACAGGAGTgggagagaaaccatttagctgtggaGACTGTGGGAAAAACTTCTATCAGAAGGGGGACTTAAGTAGGCATATacggactcacacaggagagaaattgTTTATCTGTGGTGAttgtgggaaaagcttcaatTTGAAAGGGAACCTTAGGAAGCATAaactgactcacacaggagagaaaccatttctCTGTGATGACTGTGGGAAAGGCTTCAGTCAGAAGGGGACCCTAAGGAAGCATAaactgactcacacaggagagaaaccatttagctgtggagactgtgggaaaagcttcagtCAGAAGGGGACCCTAAAGAAGCATAAacggactcacacaggagagaaatcattTAGCTGTGATGAccgtgggaggggagggggggtgaatgagccaagtggaagctggggatgatttggTGGTGgagatggtatgagggccagattgggaatgtagtctctcttgccctctttctgtgtgtgtaagCGCAAACTGTTTTAAATGCATTATTGTTTTTTCAGTCACATTTCAATAACATTCTTTATAATTGCTGTTCATAACTGCCTTCTCTGGTTTAGTGCTTGCTGTCCCATCAGTCCCAAGCAGCTGCCATTAGTCACGTGTTACAATGTGTTGTCTTTTTATTCAGTTCATGCAAGGAATGATCGTCCTAGATCAGCCTATTACTTAACACGTGGGAAAACAATGATATAATATTGTTACGTTATAATTTGTATGGAACTTGTAGTATAACCCCACCCACATCGGGGCGCTTTGTTATGTTTATGGACTAGCCACCCGCTGATAAAAACAGAATAAGACAATACGGAAGAAACTGTGAGCAGATTGTTTTGTTTGTGCCCACCATTCTTTCCTCGTGGATGTAAACATACAGGCTGAATACCCAACTCTCCATCGACAGAAACATGTCTAAACTTCAGTCGTTTCGTGTGTTTTTAAATGAGCCTTTAACAGTGGCAGCTGTGGAGATTTTCGAGGCACTTGAGCAAACAGTAGCGGAGTACCACGAGGAAAATGATCGACTACGGAGACTGCTGCGGATCACACCGGAAATACAACTGCGTAGAATAGGTTCGTGTATAGATATACTGATAGCTACAGTTCTACTCAATAAATATACTGTTCGGGATTTCAGTGACCCACAAGTTTACCATGTTTTATGAACTATTACTAGTGATGGGGAGAACGGGGATTTATGAAGCCTTTGGGGCTTTTCACAAAATTGTGCCTAAAACAAGGCCACAGGTTCCGATCTAAAagcccagtttcaactgttctgagaGGACAGCTTCGGTATTACAGTTTAACTGAAGACCGGCCAAGACAAATTCCATAGATAGAAACCGTGGTGTCATAtatttgtaggcactaactctgGCATAGTTAGTTGAAAAAAAAGCCTACGAGAAAATTGAATGCCGTTttggtctgtggtaaacacaggagaTATTATACGTTTTGTTCTCTGAGAATCTTCATCAGTTAAtgtcactttttgtgaattttgaagaaATTGTTGTGAAAAAAGTACAAAGCCATAACTGCAGGAGGTAGGGGTGCTGTATCACCCCCTGATTAATGAACAACATCTACTTATTTCAATGTCATTAATGTCCCACTTATTATATTACTCCCATGGGCTTCATTATTCCTGTGAGCAGACAGAACATGACTCCTCAGCAgcacccttaaccctaaccctaaccctattactCCCATGGGCTTTATTATTCCTGAGAGCAGACAGAACATGACTCCTCAGCAGCACCCttcctttggcagtgattacagctggatacatgttttgtaatgtttttttacTCTCTGTCAattgggttagtattgtggagtaactacaatatagttgatccatcctcagttatctcctatcacagccgttAAACTCAACTGTCTAAAGTCCCCATgggcctcgtggtgaaatccctgagcggtttccttcctctccggcaaatgACTTtgaaaggacgcctgtatctttgtagtgtctgggtgtattgatgcaccatccaaagtgtaattcatatcttcaccatgcttaaagggatattcaatgtctgcttttattttacccatctaccaataggtgcctttctttgtgaggcgttggaaaacctccctggtctttgaggttgaatctgtgttttaaattTACTGCCCGAATGATggaccttacagatcattgtatgtgtggggtacagagatgacgtagtcataaaaaaatatattgaacacacagtgagtccatgcaacttattatgtgacttgttaagcaaatgtttactcctgaaattatttagggcttgccataacaaaggagctgaattgactcaagacattagtatttcatttgtaaaaatgtctaaacgtAATTCCACTTATTTTAAATGGCGACGGTGCATAAAGATGAAAGAATTCAGAAATGAAATCTTTAGTTTGAGCACTATCCAGACTTTTTAAACTATGGCGCGCGACATTGTTCAGAAAAAACTACTTTTTC

Function

NR:

description
zinc finger protein 721-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036956924.1 True 3851 mRNA 0.43 2 12408553 12415265

Neighbor

gene id symbol gene type direction distance location
LOC110490813 LOC106576520 coding upstream 7500 12397800 ~ 12401053 (+)
LOC118943005 LOC106592567 coding upstream 24441 12368869 ~ 12384112 (+)
pphln1 LOC106593546 coding upstream 477300 11890730 ~ 11931253 (+)
LOC110515322 LOC106576579 coding upstream 610958 11724426 ~ 11797595 (+)
cntn1b LOC106593403 coding upstream 748002 11630432 ~ 11660551 (+)
LOC110490708 LOC106576521 coding downstream 2171 12417436 ~ 12419416 (+)
LOC110490703 LOC106594938 coding downstream 6368 12421633 ~ 12448308 (+)
LOC110490810 LOC106576597 coding downstream 329735 12745000 ~ 12825754 (+)
LOC110516535 LOC106576596 coding downstream 413904 12829169 ~ 12837237 (+)
LOC118943029 NA coding downstream 427117 12771599 ~ 12842545 (+)
LOC118942882 LOC106609674 non-coding upstream 12713 12391629 ~ 12421266 (+)
G1708165 NA non-coding upstream 43042 12361470 ~ 12365511 (+)
G1708160 NA non-coding upstream 52740 12355378 ~ 12355813 (+)
G1708135 NA non-coding upstream 66341 12333933 ~ 12342212 (+)
G1707971 NA non-coding upstream 243252 12165035 ~ 12165301 (+)
G1708247 NA non-coding downstream 41587 12456852 ~ 12457169 (+)
G1708250 NA non-coding downstream 44702 12459967 ~ 12460208 (+)
G1708257 NA non-coding downstream 53125 12468390 ~ 12468614 (+)
G1708268 NA non-coding downstream 68677 12483942 ~ 12484305 (+)
G1708271 NA non-coding downstream 72414 12487679 ~ 12488026 (+)
G1708014 NA other upstream 158429 12248028 ~ 12250124 (+)
G1707772 LOC106576513 other upstream 543980 11863662 ~ 11864573 (+)
G1707462 NA other upstream 753930 11653901 ~ 11654623 (+)
G1707493 LOC106609754 other upstream 839597 11568429 ~ 11568956 (+)
G1706711 NA other upstream 1009265 11398040 ~ 11399288 (+)
G1708323 NA other downstream 163343 12578608 ~ 12584156 (+)
G1708367 NA other downstream 234421 12649686 ~ 12651577 (+)
G1708495 NA other downstream 368942 12784207 ~ 12785502 (+)
G1708635 NA other downstream 536420 12951685 ~ 12952515 (+)

Expression


Co-expression Network