LOC110490703 (LOC106594938)


Basic Information

Item Value
gene id LOC110490703
gene name LOC106594938
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 12421633 ~ 12448308 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036956928.1
CATGGAAAGGGGACAGTAGGGCTCTAGACCCCACCCCCCGCCTGCCGCTACTGGCTCCAGCTCCTTACACCTCTCTCTGACAAAAAGAAACAGCGAAAGGGAGAGAGGGCGTATGAAAGAGAGCCGATGAGAATGGTACAAACCCGAACAGCTTTGTGTGTCACACTCGAATACATCGCATCCACAGCTATGACCTAGGCGCGGATCGTCGCTCTCAAGACAAGCGCAACATCGGAGAGAGCAATTACGCACATGGTTCTGATAGAGAATGAATGCGAAGCTGTATCCAACAATTCCAAAACGCCCGGTTGATCTCATTTTGCTACCATTAGAGCATCAACTGGATTACCATAAGGGAGAGACGAGAACGGAGCACAGTAGCAACGTCTTTACAATTGAGGAATAAGAGATTTTGCTCCAATAATTGAATCATTTACTTTTCATCAAAACACAAATATTTGTATGTATTTAGAGGTGTATTTCCAAGGACACATACATTAAAGCACGGATAGCCGTCATTAGGTCTACTCGGATTTGAGCATATTGACACTATTAGTTATCCTGATGGAAACTGCTTCAAAAGCTCGTCGGCTATCCAATGTGTCCACGGCATCTAACGTGTCCAATGTGTCCACGTCCAGCGCAGGGACTGAGGTAGGACAGAGCGATGTGCAGATTTGGGGGGACAGACCTTTACCTGTCGACTACCTTGGTGACATCTCGATCCTGGATGACGGGAGATGGTCTAACTCTAGCGTGAAGAAACATCACCACAAGCACAACCTGAAGCACCGCTACGAACTGCTGGAGACACTGGGGAAAGGGACATACGGCAAAGTGAAGAAAGCCATCGAGAGACAATCCGGCAAAGTGGTGGCCATTAAGTCCATCAGGAAGGAGAAGATCAAGGATGATCAGGACATGGTTCACATCCGCAGAGAGATCGAGATCATGTCCTCCCTCAAACACCCTCACATCATCTCCATCTACGAAGTGTTTGAGAACAAGGACAAGATAGTGATCGTGATGGAATACGCCAGTAAGGGAGAGTTGTATGATTACATCAGCGAGCGACGgcggctgagcgagagagagacacgacACTTCTTCAGGCAGATTGTTTCCGCCGTGCACCACTGTCACAAGAACGGAGTGGTGCACAGGGATTTAAAACTGGAAAACGTGCTGCTGGATGAAAACTGTAATATCAAGATTGCTGACTTTGGTCTGTCCAACCTTTACCACAAAGACGAGCTCCTTCAGACGTTCTGTGGCAGCCCTCTGTACGCCTCACCAGAGATCGTCAACGGCAGGCCCTACCATGGtccagagGTAGACAGTTGGGCCCTGGGAGTGCTTCTCTACACCCTGGTCTATGGGACCATGCCCTTTGATGGGGAAGACCACAATAAACTCATCCGCCAGATCACCAACGGAGAGTACAGGGAACCTACACAGTCCTCAGATGCTCGTGGTCTGATCCGCTGGATGTTGATGGTTAACCCGGAGCGTCGAGCCACGGTGGAAGACATCGCCAACCACTGGTGGGTCAATTGGGGCTGGAAGAccactgtgtgtgactgtgacgtccagaaggacaacagtggCTGCATCTCTTCTCCAACGCTAGCACGCTTTATCGATTGGCAGAACCGCACCACAGAGTCACCCAGGGTGGTGCCGGTCAAGCCCCCCCGCTCGGAACACCCTGCCGTACCCCCCCACGCTGGCCGCCAGCGCCTGAGGAAGTCCAGGAAGGAGAATGATAGCGGAGCGCTCCACCATCACACCGCGTGGGAAGACAAAGACAAACCAGGACTGAAGAGACCCAAGGGGATCCTGAAGATGCATGTGTCTGAGCAGAGGTCCCACAGCCTGGGGGAGATCGAGCTGAGTCGCTCCCTGCACTTCCACGAGGGAAGGGAGCTGCTCTCCAGCCccgagagagatgaggaagaggacgATGATCAGGATCGCCTGGGGGTCTCGCCGGCCAAGATGGTGCCCACCCTCCCCAAGAAGGGCATCCTGAAGAACAACCAGCAGCGGGAGTCTGGCTACTACTCCTCCCCGGAGCGCAGTGAGTCCTCTGAACTGCTAGGGGGCAGCACCTCCATGGCCCCACCCGCCAGCTCACCAACAAAGAGGTCCATGGGGAGAAAGGGCATATTGAAGCGTAATGGGAAGTACGGCAACTCCACTTCCTTCCACAGTGGCTTGTCCAATATGAGCTACCACGGAGAGACTCTGGGGGACTCGGGCCTCTCTCGCAGCCAGAGTAAACCCTCCAGTATTGTCTGTGAGGAGATGGGTCTCTCCAGTGTTCCCCCCTTAATGGGAATGGattggtctccctcctccccgcAGCCACACGTCAGGGCCTGTATGTCGGCTGAGGATCTACTCCAGCTGGCAGGCTTCAGACGGGGCCTCCAGACGGCTGCAGGGGGGCTCCATGGGGGGAAGGTGGGGACCCGAGGGACACCAGGGTCTCCTGGTGACGACGGCAGCTTCTCTCTGCTAGGGGACATGGATGATGTGACCCAGGTCTACCAACACACCCTGGACATCAGCAGCAATCTGACCTAGAGGAGATCGAGTTGGGAGTTTGGAAGGGAAGGGACATGGGAAGGACAGACACACACTTGAACCTTCATTTCTGGGTTAGGACTGGCCAGGTGTGTTGTGAACTGGGCATCCCAGCCACCTTAATGTACTGAATCTACCCTCTCAGAGACAGTGCTGCTGTACATCTTTACATGTTCAATAGAGCTAAATAAGTATTGTGTTGTATGTCATTCAGAGTCACAAACCATGCTGTGGTGAAACTCAATGTAGTAGACAGTTAGGACTACTGTTCATGTTATCTCAATGTAACAGACAGTTAGGACTACTGTTCATGTTATCTCAATGTAGTAGACAGTTAGGACTACTGTTCATGTTATCTCAATGTAACAGACAGTTAGGACTACTGTTCATGTTATCTCAATGTAACAGACAGTTAGGACTACTGTTCATGTTATCTCAATGTAACAGACAGTTAGGACTACTGTTCATGTTATCTCAATGTAGTAGACAGTTAGGACTACTGTTCATGTTATCTCAATGTAACAGACAGTTAGGACTACTGTTCATGTTATCTCAATGTAACAGACAGTTAGGACTACTGTTCATGTTATCTCAATGTAACAGACAGTCAGGACTACTGTTCATGTTATCTCAATGTAACAGACAGTTAGGACTACTGTTCATGTTATCTCAATGTAATGGACAGTTAGGACTACTGTTCATGTTATCTCAATGTAATGGACAGTCAGGACTACTCTCAATGTAACAGACAGTTAGGACTACTGTTCATGTTATCTCAATGTAACAGACAGTTAGGACTACTGTTCATGTTATCTCAATGTAACAGACAGTTAGGACTACTGTTCATGTTATCTCAATGTAATAGACAGTTAGGACTACTGTTCATGTTATCTCAATGTAACAGACAGTTAGGACTACTGTTCATGTTATCTCAATGTAATAGACAGTTAGGACTACTGTTCATGTTATCTCAATGTAACAGACAGTTAGGACTACTGTTCATGTTATCTCAATGTAATAGACAGTTAGGACTACTGTTCATGTTATCTCAATGTAACAGACAGTTAGGACTACTGTTCATGTTATCTCAATGTAACAGACAGTTAGGACTACTGTTCATGTTATCTCAATGTAATAGACAGTTAGGACTACTGTTCATGTTATCTCAATGTAATAGACAGTTAGGACTACTGTTCATGTTATCTCAATGTAATGGACAGTCAGGACTACTCTCAATGTAACAGACAGTTAGGACTACTGTTCATGTTGTCTCAATGTAACAGACAGTCAGGACTACTCTCAATGTAATGGACAGTCAGGACTACTCTCAATGTAACAGACAGTTAGGACTACTGTTCATGTTATCTCAATGTAATGGACAGTCAGGACTACTCTCAATGTAACAGACAATTAGGACTACTGTTCATGTTATCTCAATGTAACAGACAGTTAGGACTACTGTTCATGTTATCTCAATGTAATAGACAGTTAGGACTACTGTTCATGTTATCTCAATGTAACAGACAGTCAGGACTACTGTTCATGTTATCTCAATGTAATGGACAGTCAGGACTACTGTTCATGTTATCTCAATGTAACAGACAGTTAGGACTACTGTTCATGTTATCTCAATGTAGTAGACAGTTAGGACTACTGTTCATGTTATCTCAATGTAACAGACAATTAGGACTACTGTTCATGTTATCTCAATGTAACAGACAGTTAGGACTACTGTTCATGTTATCTCAATGTAACAGACAGTTAGGACTACTGTTCATGTTATCTCAATGTAATAGACAGTTAGGACTACTGTTCATGTTATCTCAATGTAACAGACAGTTAGGACTACTGTTCATGTTATCTCAATGTAATAGACAGTTAGGACTACTGTTCATGTTATCTCAATGTAATGGACAGTCAGGACTACTGTTCATGTTATCTCAACGTAATGGACAGTTAGGACTACTGTTCATGTTATCTCAATGTAACAGACAGTCAGGACTACTGTTCATGTTATCTCAACCTAATGATAACCGTGTGTTATCTATTTATATTGTTGAAACAGACATATATTGCCTGTGTGTTTTGGTAATTTCAAGACGTACTGAGGTGTATGTACCCTTCAAGGAATGGTACTGTATAATAGTATTGCTTGATTGAATTGACATGAATGCCATACTTGATATTGGTCCTAATCCAGCAGGACATCTATTGTTCAGTATCACAGTGGGAAGGTTGAAGAGCAAACCGTGTGTATTGATATAAGTCTACTGTATGGGCCGTCCACAGGAAGTGCCTTTATTAGTGCTATGTTATCATGTACTGTATTTCCTGAAGGTTTATGGAGGAACAGATAGATAACCAACCAAACTCACCACACGAGACACAACTATAGGGAGGCGATTCACAGAGCTGTGACCACGCAGTCTCCCGAGTCGAAACAACTAGGACTTGTTCATGTTCGTAACCATTTGGTTTCACAGTAGAACTGTCGTTGTTTTAGAAATGGGACTGAAAGACAGAACGACTGAAAGAACAGAAGAAGGTGGGTAGAGACCTGTAGTCAAAACTTAAGTTGATTCACAGAGTTGTGGCTACAAGCCCTCCAGTCTACAGGACTAGCTCATGTGTAGGCCGTATGTAAATGAACTGTCGTTGTTTTAGAAAGAGAAATACTGAAAAAACAAGGGGTAGATAGACGTGAGTTAGTGGGAGGAGTTAATGGGTTGGTTGTAGAGGTCTTGTTTGTGGAGGGAAGTTGGGTGCTGGCCAGGGCTGTTACACCTCTTCCTCCCCAGACTGAAGActgagagtggagagagaaaagagggggttgagagagagagaaagagagagagagggctgagagagggctgagagggctgagagagagagagggctgagagagagagagagagagagagagtgctgagaGAGTGCTGAgagagtgctgagagagagagagagagagaggagatgatagacagagagagcgataGTAGCTTAATGTAGCTGGGAAAAGaaagggggagtagagagagagagaaaggttgagTGAAAAAGGTAAAATGGAAAGAATGTTTGGAAGGGTGAAGGGAATTATGTTTCAGCTGACCGAATAAGTTCAGCTTTAAGTTGGGAAGATACACAGTTCAACACATTTCAGCTGAAAGTCATTACAGTCACTGTAGCTGAAAGTCATTACAGTCACTGTAGCTGAAAGTCATTACAGTCACTGTAGCTGAAAGTCATTACAGTCACTGTAGCTGAAAGTCATTACAGTCACTGTAGCTGAAAGTCATTACAGTCACTGTAGCTGAAAGTCATTACAGTCACTGTAGCTGAAAGTCATTACAGTCACTGTAGCTGAAAGTCATTACAGTCACTGTAGCTGAAGGTCATTACAGTCACTGTAGCTGAAAGTCATTACAGTCACTGTAGCTGAAAGTCATTACAGTCACTGTAGCTGAAAGTCATTACAGTCACTGTAGCTGAAAGTCATTACAGTCACTGTAGCTGAAAGTCATTACAGTCACTGTAGCTGAAGGTCATTACAGTCACTGTAGCTGAAAGTCATTACAGTCACTGTAGCTGAAAGTCATTACAGTCACTGTAGCTGAAAGTCATTACAGTCACTGTAGCTGAAAGTCATTACAGTCACTGTAGCTGAAAGTCATTACAGTCACTGTAGCTGAAAGTCATTACAGTCACTGTAGCTGAAAGTCATTACAGTCACTGTAGCTGAAAGTCATTACAGTCACTGTAGCTGAAAGTCATTACAGTCACTGTAGCTGAAAGTCATTACAGTCACTGTAGCTGAAAGTCATTACAGTCACTGTAGCTGAAGATCATTACAGTCACTGTAGCTGAAAGTCATTACAGTCACGGTAGCTGAAAGTCATTACAGTCACTGTAGCTGAAGGTCATTACAGTCACTGTAGCTGAAAGTCATTACAGTCACTGTAGCTGAAGGTCATTACAGTCACTGGAGCTGAAAGTCATTACAGTCACTGTAGCTGAAAGTCATTACAGCCATTGCAGCTGAAAGTCATTACAGTCACTGTAGGTGAAGATCATTACAGTCACTGTAGCTGAAAGTCATTACAGCCATTGCAGCTGAAAGTCATTACAGTCACTGTAGCTGAAGGTCATTACAGTCACTGTAGCTGAAGGTCATTACAGTCACTGTAGCTGAAGGTCATTACAGTCACTGTAGCTGAAGGTCATTACAGCCATTGCAGCTGAAAGTCATTACAGTCACTGTAGCTGAAAGTCATTACAGTCACTGTAGCTGAAGGTCATTACAGTCACTGTAGCTGAAGGTCATTACAGCCATTGCAGCTGAAAGTCATTACAGTCACTGTAGGTGAAAGTCATTACAGTCACTGTAGCTGAAAGTCATTACAGTCACTGTAGCTGAAAGTCATTACAGTCACTGTAGCTGAAAGTCATTACAGTCACTGTAGCTGGTACTATACATCCTTGGTAgaacagcagtgtgttagctCACTGTGAGTGTTACATATAGAtgaccttctctctctacagcctGTGTGCTGCTGGACCAGTTATATGTGCTCTATGAAGCGTGGCTTGGTGAGAGGGCATAACCTTCAGTTCCACTCTAGAACAGAAATAACCCAGGCAATTATATGTTTCAGTGTGTTTGGGTTTCTCAAACACCACACGGTTGTTTAAATGTCtgggtttgtgtcccaaatggcaccctattggtTACTTTTGAACGCAGTTCTATGGGCCCTTTgtgaaaaggagtgcactacataggaaataggttgccatttgggacacaggcccaGACATTTAAACAATCGGGTGGTGTCCGAGAAACCCAAACAGACTGAAGCATATTAGTGTTGAGAAATCAATGGAGCCCCACTGTGGAAATGTCACATACGCCAACGGATAGCTcatcaaaataaatcaaaatcAGCCAATGAATGATTCTGAAAGGTCAGGGGTCTTTATGGCTCAGGGCCCAGGGTGTTACCATAACAACCAACAGTCTTGTTAAGTGTTGTATGGACTGAAATGGTATTTTGTAACTGGATTTTACAGCGCTGAAAAATGATACTATGTTAGTATTTTCATAGGATTTGTTTTTAATCATGCTTCTGTTTTTGATTTTTCCAAAATATAGAAACATTGTATGGTTTTATTTTATGGGCAGAGGATGTGTACCAGGTCTGCCTTAGTAACTGGAAGGGGACCTGCCTCCTATGAAAACAGGGTtagcgtatgtgtgtgtataagggacTGAAGAGGTTAAAGTTCAACAACAGTAAAGAACAAGTTGTAAACACAAGTGATTCtctgggagacacacacacacacacacacacacacacacacacctatgtaGAATGTAATGGAAAAGAAAGGGGTGCCATCAAGTCTCAACAGGTCTAAGAGCCCCCAAGCTGCCCTCTGCCTAACTAGACAAAACAGATGTTAGCCTACATCTGTTTGTTACAATATGTCATATAACTATAGGAAAACTTGACTAGATATTATCTTATGATGAAGTATTATAATGttatttaagctttattttgCTGCTGTCTATTAATAGTGAAgttattactgttactatagttactatctGGTTATAGATGGTTCAACCTGGATCGTGCTTTTGTTTGTTACCATCACAGATGTGCTGTTCTGGTTTTTATAAAAACAGTTTCAGATTGTGTAATAGCGTTGTTCTCTACTACGTATTACAGTGGAAATCATGTATGTAGTCAGGAGAGTGAGGAAACCACAGATTCTCACAATATCTTCTTTCTGAATCATCTCAAATAAACAGCTCCATTTCAGTC

Function

NR:

description
PREDICTED: NUAK family SNF1-like kinase 1

GO:

id name namespace
GO:0006468 protein phosphorylation biological_process
GO:0005524 ATP binding molecular_function
GO:0004674 protein serine/threonine kinase activity molecular_function

KEGG:

id description
K08800 NUAK; NUAK family, SNF1-like kinase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036956928.1 True 8432 mRNA 0.44 7 12421633 12448308

Neighbor

gene id symbol gene type direction distance location
LOC118942882 LOC106609674 coding upstream 367 12391629 ~ 12421266 (+)
LOC110490708 LOC106576521 coding upstream 2217 12417436 ~ 12419416 (+)
LOC118936492 LOC106609674 coding upstream 6368 12408553 ~ 12415265 (+)
LOC110490813 LOC106576520 coding upstream 20580 12397800 ~ 12401053 (+)
LOC118943005 LOC106592567 coding upstream 37521 12368869 ~ 12384112 (+)
LOC110490810 LOC106576597 coding downstream 296692 12745000 ~ 12825754 (+)
LOC110516535 LOC106576596 coding downstream 380861 12829169 ~ 12837237 (+)
LOC118943029 NA coding downstream 394074 12771599 ~ 12842545 (+)
LOC118942883 LOC106596479 coding downstream 395795 12844103 ~ 12860368 (+)
cmas cmas coding downstream 419180 12867488 ~ 12885849 (+)
G1708165 NA non-coding upstream 56122 12361470 ~ 12365511 (+)
G1708160 NA non-coding upstream 65820 12355378 ~ 12355813 (+)
G1708135 NA non-coding upstream 79421 12333933 ~ 12342212 (+)
G1707971 NA non-coding upstream 256332 12165035 ~ 12165301 (+)
G1708247 NA non-coding downstream 8544 12456852 ~ 12457169 (+)
G1708250 NA non-coding downstream 11659 12459967 ~ 12460208 (+)
G1708257 NA non-coding downstream 20082 12468390 ~ 12468614 (+)
G1708268 NA non-coding downstream 35634 12483942 ~ 12484305 (+)
G1708271 NA non-coding downstream 39371 12487679 ~ 12488026 (+)
G1708014 NA other upstream 171509 12248028 ~ 12250124 (+)
G1707772 LOC106576513 other upstream 557060 11863662 ~ 11864573 (+)
G1707462 NA other upstream 767010 11653901 ~ 11654623 (+)
G1707493 LOC106609754 other upstream 852677 11568429 ~ 11568956 (+)
G1706711 NA other upstream 1022345 11398040 ~ 11399288 (+)
G1708323 NA other downstream 130300 12578608 ~ 12584156 (+)
G1708367 NA other downstream 201378 12649686 ~ 12651577 (+)
G1708495 NA other downstream 335899 12784207 ~ 12785502 (+)
G1708635 NA other downstream 503377 12951685 ~ 12952515 (+)

Expression


Co-expression Network