Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC118943029 |
| gene name | NA |
| gene type | misc |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 12771599 ~ 12842545 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_005038765.1 | False | 141 | mRNA | 0.48 | 1 | 12842382 | 12842522 |
| TU1957019 | True | 242 | lncRNA | 0.47 | 3 | 12771599 | 12842545 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110516535 | LOC106576596 | coding | upstream | 5145 | 12829169 ~ 12837237 (+) |
| LOC110490810 | LOC106576597 | coding | upstream | 16628 | 12745000 ~ 12825754 (+) |
| LOC110490703 | LOC106594938 | coding | upstream | 394074 | 12421633 ~ 12448308 (+) |
| LOC110490708 | LOC106576521 | coding | upstream | 422966 | 12417436 ~ 12419416 (+) |
| LOC118936492 | LOC106609674 | coding | upstream | 427117 | 12408553 ~ 12415265 (+) |
| LOC118942883 | LOC106596479 | coding | downstream | 1581 | 12844103 ~ 12860368 (+) |
| cmas | cmas | coding | downstream | 24966 | 12867488 ~ 12885849 (+) |
| LOC118942885 | LOC106576602 | coding | downstream | 128391 | 12970913 ~ 12974793 (+) |
| LOC110490630 | LOC106609716 | coding | downstream | 172644 | 13015166 ~ 13034215 (+) |
| LOC110490636 | LOC106576583 | coding | downstream | 194710 | 13037232 ~ 13051496 (+) |
| G1708492 | NA | non-coding | upstream | 70995 | 12770722 ~ 12771387 (+) |
| G1708410 | NA | non-coding | upstream | 109440 | 12712997 ~ 12732942 (+) |
| G1708422 | NA | non-coding | upstream | 114884 | 12726527 ~ 12727498 (+) |
| G1708413 | NA | non-coding | upstream | 125465 | 12716161 ~ 12716917 (+) |
| G1708370 | NA | non-coding | upstream | 183732 | 12658006 ~ 12658650 (+) |
| G1708602 | NA | non-coding | downstream | 58761 | 12901283 ~ 12907083 (+) |
| G1708643 | NA | non-coding | downstream | 117939 | 12960461 ~ 12960856 (+) |
| G1708646 | NA | non-coding | downstream | 122019 | 12964541 ~ 12964769 (+) |
| G1708650 | NA | non-coding | downstream | 136609 | 12979131 ~ 12979348 (+) |
| G1708495 | NA | other | upstream | 56880 | 12784207 ~ 12785502 (+) |
| G1708367 | NA | other | upstream | 190805 | 12649686 ~ 12651577 (+) |
| G1708323 | NA | other | upstream | 258226 | 12578608 ~ 12584156 (+) |
| G1708014 | NA | other | upstream | 592258 | 12248028 ~ 12250124 (+) |
| G1708635 | NA | other | downstream | 109163 | 12951685 ~ 12952515 (+) |
| LOC110490642 | LOC106597584 | other | downstream | 210011 | 13051847 ~ 13058457 (+) |
| G1708702 | NA | other | downstream | 257319 | 13099841 ~ 13101833 (+) |
| G1709276 | zdhhc17 | other | downstream | 913664 | 13756186 ~ 13765456 (+) |
| LOC110499758 | osbpl8 | other | downstream | 1078036 | 13794979 ~ 13950916 (+) |
| LOC118942882 | LOC106609674 | coding | upstream | 350333 | 12391629 ~ 12421266 (+) |
| G1707772 | LOC106576513 | other | upstream | 907026 | 11863662 ~ 11864573 (+) |
| G1707462 | NA | other | upstream | 1116976 | 11653901 ~ 11654623 (+) |
