Gene
RNA
| Item | Value |
|---|---|
| gene id | cmas |
| gene name | cmas |
| gene type | misc |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 12867488 ~ 12885849 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| symbol | description |
|---|---|
| cmas | Predicted to enable N-acylneuraminate cytidylyltransferase activity. Predicted to be involved in N-acetylneuraminate metabolic process. Located in membrane and nucleus. |
| description |
|---|
| unnamed protein product, partial |
| id | name | namespace |
|---|---|---|
| GO:0006054 | N-acetylneuraminate metabolic process | biological_process |
| GO:0009103 | lipopolysaccharide biosynthetic process | biological_process |
| GO:0005634 | nucleus | cellular_component |
| GO:0008781 | N-acylneuraminate cytidylyltransferase activity | molecular_function |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| NM_001124190.1 | False | 1480 | mRNA | 0.54 | 8 | 12867488 | 12885770 |
| TU1957035 | True | 206 | lncRNA | 0.42 | 1 | 12885644 | 12885849 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118942883 | LOC106596479 | coding | upstream | 7120 | 12844103 ~ 12860368 (+) |
| LOC118943029 | NA | coding | upstream | 24966 | 12771599 ~ 12842545 (+) |
| LOC110516535 | LOC106576596 | coding | upstream | 30251 | 12829169 ~ 12837237 (+) |
| LOC110490810 | LOC106576597 | coding | upstream | 41734 | 12745000 ~ 12825754 (+) |
| LOC110490703 | LOC106594938 | coding | upstream | 419180 | 12421633 ~ 12448308 (+) |
| LOC118942885 | LOC106576602 | coding | downstream | 85143 | 12970913 ~ 12974793 (+) |
| LOC110490630 | LOC106609716 | coding | downstream | 129396 | 13015166 ~ 13034215 (+) |
| LOC110490636 | LOC106576583 | coding | downstream | 151462 | 13037232 ~ 13051496 (+) |
| LOC110490642 | LOC106597584 | coding | downstream | 166077 | 13051847 ~ 13058457 (+) |
| LOC110518396 | LOC106609712 | coding | downstream | 172935 | 13058705 ~ 13066794 (+) |
| G1708492 | NA | non-coding | upstream | 96101 | 12770722 ~ 12771387 (+) |
| G1708410 | NA | non-coding | upstream | 134546 | 12712997 ~ 12732942 (+) |
| G1708602 | NA | non-coding | downstream | 15513 | 12901283 ~ 12907083 (+) |
| G1708643 | NA | non-coding | downstream | 74691 | 12960461 ~ 12960856 (+) |
| G1708646 | NA | non-coding | downstream | 78771 | 12964541 ~ 12964769 (+) |
| G1708650 | NA | non-coding | downstream | 93361 | 12979131 ~ 12979348 (+) |
| G1708651 | NA | non-coding | downstream | 96008 | 12981778 ~ 12982204 (+) |
| G1708495 | NA | other | upstream | 81986 | 12784207 ~ 12785502 (+) |
| G1708367 | NA | other | upstream | 215911 | 12649686 ~ 12651577 (+) |
| G1708323 | NA | other | upstream | 283332 | 12578608 ~ 12584156 (+) |
| G1708014 | NA | other | upstream | 617364 | 12248028 ~ 12250124 (+) |
| G1708635 | NA | other | downstream | 65915 | 12951685 ~ 12952515 (+) |
| G1708702 | NA | other | downstream | 214071 | 13099841 ~ 13101833 (+) |
| G1709276 | zdhhc17 | other | downstream | 870416 | 13756186 ~ 13765456 (+) |
| LOC110499758 | osbpl8 | other | downstream | 1034788 | 13794979 ~ 13950916 (+) |
| G1708422 | NA | non-coding | upstream | 158146 | 12726527 ~ 12727498 (+) |
| G1708413 | NA | non-coding | upstream | 168727 | 12716161 ~ 12716917 (+) |
