LOC110490653 (ctrb)


Basic Information

Item Value
gene id LOC110490653
gene name ctrb
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 13227798 ~ 13229394 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021564127.2
CTCCCATTGGTTATAGACAGGTGGGGTTTGGGAATAAATAGGGTCCCCGGTCCACTAGACTGTCACATTCTCACAATGGCTTTCCTCTGGTTCGTGTCCTGTCTCGCTTTCATCAGCGCCGCCTACGGCTGCGGCATCCCCGCCATCAAGCCCGAGGTGTCTGGCTATGCCCGCATCGTTAATGGTGAGGAGGCTGTGCCCCACTCCTGGCCCTGGCAGGTATCTCTGCAGCAGACCAGCGGCTTCCACTTCTGTGGGGGATCCCTGATCAACGAGAACTGGGTGGTCACCGCCGCTCACTGCAACGTCGCTACCTACCACCGCGTGATCGTTGGAGAGCACAAGAGGGGCAGCGGCAACAATGCTGAGGACATCCAGATCCTGAAGCCCGCTAAGGTGTTCACCCACCCCAAGTGGAACCCCAGTACCATCAACAACGATATCTCCCTGATCAAGCTGTCCACCCCTGCTGTCCTGAACACCAATGTGTCCCCGGTGTGCCTGGCTGAGACCGCCGACGTCTTTGCACCTGGCATGACCTGTGTGACCTCCGGCTGGGGTCTGCTGCGCTACAATGCTATCAACACCCCTAACGAGCTGCAGCAGGCTGCTCTGCCCCTGCTGTCCAACGAGCAGTGCAAGCAGCACTGGGGGAGCAGCATCTCCGACGTCATGATCTGTGCCGGTGGTGCTGGTGCTACCTCCTGCATGGGTGACTCCGGTGGCCCCCTGGTCTGTGAGAAGGACAACGTCTGGACCCTGGTCGGTATTGTGTCCTGGGGCAGCAGCCGTTGCTCCACCACTACTCCCGCTGTGTACGCCCGCGTCACCGAGCTCCGTTCCTGGGTGGACCAGACCCTGGCCGCCAACTAAGAGCCATGCTGCAGCGTCCCTGTCCATCCTGTATATTGCTATGTCATTTTATGCATTGTTATGTCATACTATGTTTTGCTATGTCATTCTATATATTACTATGTAATGTACAACAACTAAACATTAGCTACCAAGACTGAGAGTGCCACCCATTGGTCTGAACTGAACATGACATTCAATAAACATACTTGAACATAAAAAATA

Function

symbol description
ctrb chymotrypsin

NR:

description
chymotrypsin B-like

GO:

id name namespace
GO:0006508 proteolysis biological_process
GO:0004252 serine-type endopeptidase activity molecular_function

KEGG:

id description
K01310 CTRB; chymotrypsin

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021564127.2 True 1077 mRNA 0.56 3 13227798 13229394

Neighbor

gene id symbol gene type direction distance location
LOC110490647 LOC106576589 coding upstream 153429 13070036 ~ 13074369 (+)
LOC110518396 LOC106609712 coding upstream 161004 13058705 ~ 13066794 (+)
LOC110490642 LOC106597584 coding upstream 169341 13051847 ~ 13058457 (+)
LOC110490636 LOC106576583 coding upstream 176302 13037232 ~ 13051496 (+)
LOC110490630 LOC106609716 coding upstream 193583 13015166 ~ 13034215 (+)
LOC118942887 NA coding downstream 1681 13231075 ~ 13231826 (+)
LOC110500963 LOC106609744 coding downstream 469123 13698517 ~ 13725137 (+)
crp crp coding downstream 509664 13739058 ~ 13748205 (+)
LOC110499758 osbpl8 coding downstream 565585 13794979 ~ 13950916 (+)
LOC110516615 LOC106576514 coding downstream 757838 13987232 ~ 14007450 (+)
G1708762 NA non-coding upstream 1023 13226452 ~ 13226775 (+)
G1708761 NA non-coding upstream 7088 13219975 ~ 13220710 (+)
G1708753 NA non-coding upstream 30585 13196916 ~ 13197213 (+)
G1708736 NA non-coding upstream 73182 13154298 ~ 13154616 (+)
G1708734 NA non-coding upstream 76057 13151536 ~ 13151741 (+)
G1708827 NA non-coding downstream 148451 13377845 ~ 13402223 (+)
G1708840 NA non-coding downstream 175446 13404840 ~ 13405199 (+)
G1708841 NA non-coding downstream 177022 13406416 ~ 13406651 (+)
G1708844 NA non-coding downstream 189084 13418478 ~ 13418693 (+)
G1708846 NA non-coding downstream 193588 13422982 ~ 13423183 (+)
G1708702 NA other upstream 125965 13099841 ~ 13101833 (+)
G1708635 NA other upstream 275283 12951685 ~ 12952515 (+)
LOC110490810 LOC106576597 other upstream 414070 12745000 ~ 12825754 (+)
G1708495 NA other upstream 442296 12784207 ~ 12785502 (+)
G1709276 zdhhc17 other downstream 526792 13756186 ~ 13765456 (+)
G1709592 NA other downstream 836455 14065849 ~ 14066683 (+)
LOC118942889 LOC106609776 other downstream 1304989 14533785 ~ 14548855 (+)
G1709824 NA other downstream 1426293 14655687 ~ 14657284 (+)

Expression


Co-expression Network