Gene
RNA
| Item | Value |
|---|---|
| gene id | crp |
| gene name | crp |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 13739058 ~ 13748205 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| symbol | description |
|---|---|
| crp | Enables cholesterol binding activity. Human ortholog(s) of this gene implicated in several diseases, including Kawasaki disease; autoimmune disease (multiple); macular degeneration (multiple); middle cerebral artery infarction; and nephritis (multiple). Orthologous to human CRP (C-reactive protein). |
| description |
|---|
| c-reactive protein, pentraxin-related |
| id | name | namespace |
|---|---|---|
| GO:0008270 | zinc ion binding | molecular_function |
| id | description |
|---|---|
| K09377 | CSRP; cysteine and glycine-rich protein |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_036956480.1 | False | 1100 | mRNA | 0.46 | 5 | 13739058 | 13748205 |
| NM_001124725.1 | False | 817 | mRNA | 0.52 | 6 | 13739471 | 13748205 |
| XM_036956479.1 | True | 750 | mRNA | 0.52 | 6 | 13739657 | 13748205 |
13,734,000
13,736,000
13,738,000
13,740,000
13,742,000
13,744,000
13,746,000
13,748,000
13,750,000
13,752,000
13,754,000
NC_048585.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110500963 | LOC106609744 | coding | upstream | 13921 | 13698517 ~ 13725137 (+) |
| LOC118942887 | NA | coding | upstream | 507232 | 13231075 ~ 13231826 (+) |
| LOC110490653 | ctrb | coding | upstream | 509664 | 13227798 ~ 13229394 (+) |
| LOC110490647 | LOC106576589 | coding | upstream | 664689 | 13070036 ~ 13074369 (+) |
| LOC110518396 | LOC106609712 | coding | upstream | 672264 | 13058705 ~ 13066794 (+) |
| LOC110499758 | osbpl8 | coding | downstream | 46774 | 13794979 ~ 13950916 (+) |
| LOC110516615 | LOC106576514 | coding | downstream | 239027 | 13987232 ~ 14007450 (+) |
| LOC118943011 | NA | coding | downstream | 249991 | 13998196 ~ 13998336 (+) |
| LOC118943020 | NA | coding | downstream | 254737 | 14002942 ~ 14003071 (+) |
| LOC110499761 | LOC106597692 | coding | downstream | 265567 | 14013772 ~ 14016243 (+) |
| G1709262 | NA | non-coding | upstream | 16729 | 13722072 ~ 13722329 (+) |
| G1709252 | NA | non-coding | upstream | 22034 | 13714682 ~ 13717024 (+) |
| G1709194 | NA | non-coding | upstream | 59928 | 13640350 ~ 13679130 (+) |
| G1709192 | NA | non-coding | upstream | 91580 | 13635411 ~ 13647478 (+) |
| G1709268 | NA | non-coding | downstream | 130 | 13748335 ~ 13751291 (+) |
| G1709273 | NA | non-coding | downstream | 3939 | 13752144 ~ 13752842 (+) |
| G1709286 | NA | non-coding | downstream | 22478 | 13770683 ~ 13771339 (+) |
| G1709320 | NA | non-coding | downstream | 79727 | 13827932 ~ 13828788 (+) |
| G1709322 | NA | non-coding | downstream | 88164 | 13836369 ~ 13836910 (+) |
| G1708702 | NA | other | upstream | 637225 | 13099841 ~ 13101833 (+) |
| LOC110490642 | LOC106597584 | other | upstream | 685089 | 13051847 ~ 13058457 (+) |
| G1708635 | NA | other | upstream | 786543 | 12951685 ~ 12952515 (+) |
| LOC110490810 | LOC106576597 | other | upstream | 925330 | 12745000 ~ 12825754 (+) |
| G1708495 | NA | other | upstream | 953556 | 12784207 ~ 12785502 (+) |
| G1709276 | zdhhc17 | other | downstream | 7981 | 13756186 ~ 13765456 (+) |
| G1709592 | NA | other | downstream | 317644 | 14065849 ~ 14066683 (+) |
| LOC118942889 | LOC106609776 | other | downstream | 786178 | 14533785 ~ 14548855 (+) |
| G1709824 | NA | other | downstream | 907482 | 14655687 ~ 14657284 (+) |
