LOC110499761 (LOC106597692)


Basic Information

Item Value
gene id LOC110499761
gene name LOC106597692
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 14013772 ~ 14016243 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021576825.2
AACTGTGCGTATCAGTCACACCAGCGACCGCTGCCGACGGACTAGTATCAAATACCCTGCACACACATCCACGAGTTCCACAGCACATAGTAACCCACTCACTGCAGTGACCATTTCAGCATCCGATGCCTTTACCTCTACGGGCAAGGAGAAGAAGAAGTGTTTGCATTTGCTGAGAAAATTGGGGCGTTTTCTCAAGATGCTGGAGAACGGCGGCAAGGTGCTGAAAGAGGGGCTTCTGGAGAAGCGAAGCGACGGTTTGCTGCAGCTGTGGAAGAAGAAGCACTGCGTCCTCACGGAGGACGGGGTTCTGCTTCACCCGCCGAAGCAGCACGACCACCCGCACCATTACAACCACCACGGCGGCGGAGACACTGGCAAAGTCAAGGAGCTGCACTTCTCCAACATGAAAACTGTGGACTGCGTCGAGAGGAAAGGGAAATACATCTACTTCACCGTGGTCATGTCGGAGGGCAAGGAGATCGATTTCAGGTGTCCACAGGACGAGGGCTGGAACGCCGAGATAACTTTGCAGATGGTGCAATACAAAAACAGGCAGGCCATCCTGGCGGTGAAGTCTACCAGACAGAAACAGCAGCTCCTCGTTGTTCAGCTCCCAGGACAGAAAATTATTCGGAGCTCTCCAAACGTTGCGTGACCTGCGCCTCGGACATTCGACGTGCGGTTAATTGGACATTCAGAGGAGGGATCGATGGACTCCTGCTGCATCTGCCCGGCCTCACAAAAGGAGCGTCACACCCCGCAGAAAACATCTCATAATTTAACTGTTGTTCGGTCCCGACAACAGCAGCAGTCTTTTCTCAGTCCTATTTTTCATTAGAGACTCTTTATTTGAGACAGATGGACACTGATGGACAAAGCTTAGGCCTCTGCTACAGCACGAGTGAAAACAGCTGTATTCTAACGGGCGATTCTCTGCCACCCCCTTCTTATTTATTAGATtgtgtatatatgtttttatCTTAACAGTGTCATTGACTAATGTACAGTGTGGTTGTTGCTGGAGTTGAAACTGAAAGCTATGCTTGGAGATTCCGTAGGACAGTctaatgttttgttatgattggACATAAGCCTCAGTATCGTTGTGATCCTGGTGGGATGGTTGATTGTGTTACACCTTTAAGGATGTACCAGAgtcccttcctttcccttctaCTATTTCTAGAGGTGTGAGTAGCACATCCTATTGTAAATCTGTGGCCATGATACACATCCTCATTCTTTTATTGAACCAAAGACTTATACGGTATAGTTGCATTTTCCTCCCAAGTGTAGTTGACTGTAAAAATGGCAGGATGCTTCAATGATGAAGGAAATGTTGACAAATCTTTTATTTGTTTGATTTCTCCATAAATCTCACGTTTTGTGATTATCCTCGTGCCAGATATTGGCACCCTTTTGCATTACAACTATGGAATATGGTTTGACTTTAGGAAGCAACATGTGCCAACGCTGCATATTCTTTTGGGAGTTCTTTTCAGTGGGAACTGATAGAAAGGTATCCTAGTGAGCAAAACTGGTTGAACATTTCCTTTCAATGGCAAAAGTGTCCAAAAGGACTTATTTTCAACCAGTTTTGCCAAGAGCAAGTCATTAGGCTAAAAATTCATCACCATCTTTCCTGAGGAAGCTATGCTGAGACTGACTGTTGAGTTGCCCCCTCACACCACCCCTGGTGTGTCAGGGTTGTCCTCACGTTAACACATgggtcctttttttt

Function

NR:

description
PREDICTED: pleckstrin homology-like domain family A member 1

GO: NA

KEGG:

id description
K23793 PHLDA; pleckstrin homology-like domain family A

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021576825.2 True 1744 mRNA 0.47 2 14013772 14016243

Neighbor

gene id symbol gene type direction distance location
LOC110516615 LOC106576514 coding upstream 6322 13987232 ~ 14007450 (+)
LOC118943020 NA coding upstream 10701 14002942 ~ 14003071 (+)
LOC118943011 NA coding upstream 15436 13998196 ~ 13998336 (+)
LOC110499758 osbpl8 coding upstream 63340 13794979 ~ 13950916 (+)
crp crp coding upstream 265567 13739058 ~ 13748205 (+)
LOC118942888 NA coding downstream 1466 14017709 ~ 14018310 (+)
LOC110500967 LOC106609789 coding downstream 87574 14103817 ~ 14115795 (+)
LOC110499766 LOC106576530 coding downstream 100303 14116546 ~ 14127586 (+)
LOC110499776 LOC106609772 coding downstream 265809 14282052 ~ 14288120 (+)
LOC110499784 kcnc2 coding downstream 279724 14295967 ~ 14378043 (+)
G1709301 NA non-coding upstream 61587 13951133 ~ 13952185 (+)
G1709363 NA non-coding upstream 67369 13945662 ~ 13946403 (+)
G1709362 NA non-coding upstream 68142 13945302 ~ 13945630 (+)
G1709361 NA non-coding upstream 69459 13943718 ~ 13944313 (+)
G1709360 NA non-coding upstream 77894 13935487 ~ 13935878 (+)
G1709580 NA non-coding downstream 42700 14058943 ~ 14059216 (+)
G1709584 NA non-coding downstream 44551 14060794 ~ 14061124 (+)
G1709594 NA non-coding downstream 50898 14067141 ~ 14067527 (+)
G1709607 NA non-coding downstream 62551 14078794 ~ 14079007 (+)
G1709276 zdhhc17 other upstream 248316 13756186 ~ 13765456 (+)
G1708702 NA other upstream 911939 13099841 ~ 13101833 (+)
LOC110490642 LOC106597584 other upstream 959803 13051847 ~ 13058457 (+)
G1708635 NA other upstream 1061257 12951685 ~ 12952515 (+)
G1709592 NA other downstream 49606 14065849 ~ 14066683 (+)
LOC118942889 LOC106609776 other downstream 518140 14533785 ~ 14548855 (+)
G1709824 NA other downstream 639444 14655687 ~ 14657284 (+)
G1709840 NA other downstream 663239 14679482 ~ 14682208 (+)
G1710321 NA other downstream 1116889 15133132 ~ 15133588 (+)

Expression


Co-expression Network