LOC118942888


Basic Information

Item Value
gene id LOC118942888
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 14017709 ~ 14018310 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005038535.1
AGCCCCTCCCCCCCAGCCCTTCTCCCCTCTCACCCAGCTCCAGCCCCTCTCACCCAGCTCCAGCCCCTCTCACACAGCCCCTCCCCCAGCCCTTCTGCCCTCTCCCACTCTTCTTCCTCACTTTAATTGGTTTGTTAGGTCTGGAATGTCATTCACATGACTCCCAACAAAGATTGGCGCCTAGATAAATATTGATTGTCATATGAGCTGCAGTGATGTTTTCTGTACACTCAGTACTTAGTTCTTAATAAGGATAATGTAGGTTATTGCAGTGATGTTTTCAGTACACTCAGTACTTAGTTCTTAGTAAGGATAATGTAGGTTATTGCCAACTGTTTTTTTAAAGAGCTCTCCTCATTTTTGCACTGATTAAACACATATTGTCTCATTTTATATTTACTTATTGGCAGTGTAAATCTAGCCTTCTCAAGATTCCCTAAAAACCCAATGTGGATCTAAAAAATACAATGTAGAATTTCTGTCCTGTGAATTTCCTTGTGCTCATTATGACAGTACACCTGCTCATCAGTCTAGTGAATGGAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005038535.1 True 543 mRNA 0.42 2 14017709 14018310

Neighbor

gene id symbol gene type direction distance location
LOC110499761 LOC106597692 coding upstream 1466 14013772 ~ 14016243 (+)
LOC110516615 LOC106576514 coding upstream 10259 13987232 ~ 14007450 (+)
LOC118943020 NA coding upstream 14638 14002942 ~ 14003071 (+)
LOC118943011 NA coding upstream 19373 13998196 ~ 13998336 (+)
LOC110499758 osbpl8 coding upstream 67277 13794979 ~ 13950916 (+)
LOC110500967 LOC106609789 coding downstream 85507 14103817 ~ 14115795 (+)
LOC110499766 LOC106576530 coding downstream 98236 14116546 ~ 14127586 (+)
LOC110499776 LOC106609772 coding downstream 263742 14282052 ~ 14288120 (+)
LOC110499784 kcnc2 coding downstream 277657 14295967 ~ 14378043 (+)
LOC110499786 pmpcb coding downstream 459945 14478255 ~ 14482429 (+)
G1709301 NA non-coding upstream 65524 13951133 ~ 13952185 (+)
G1709363 NA non-coding upstream 71306 13945662 ~ 13946403 (+)
G1709362 NA non-coding upstream 72079 13945302 ~ 13945630 (+)
G1709361 NA non-coding upstream 73396 13943718 ~ 13944313 (+)
G1709360 NA non-coding upstream 81831 13935487 ~ 13935878 (+)
G1709580 NA non-coding downstream 40633 14058943 ~ 14059216 (+)
G1709584 NA non-coding downstream 42484 14060794 ~ 14061124 (+)
G1709594 NA non-coding downstream 48831 14067141 ~ 14067527 (+)
G1709607 NA non-coding downstream 60484 14078794 ~ 14079007 (+)
G1709276 zdhhc17 other upstream 252253 13756186 ~ 13765456 (+)
G1708702 NA other upstream 915876 13099841 ~ 13101833 (+)
LOC110490642 LOC106597584 other upstream 963740 13051847 ~ 13058457 (+)
G1708635 NA other upstream 1065194 12951685 ~ 12952515 (+)
G1709592 NA other downstream 47539 14065849 ~ 14066683 (+)
LOC118942889 LOC106609776 other downstream 516073 14533785 ~ 14548855 (+)
G1709824 NA other downstream 637377 14655687 ~ 14657284 (+)
G1709840 NA other downstream 661172 14679482 ~ 14682208 (+)
G1710321 NA other downstream 1114822 15133132 ~ 15133588 (+)

Expression


Co-expression Network