LOC110499856 (LOC106609654)


Basic Information

Item Value
gene id LOC110499856
gene name LOC106609654
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 16594427 ~ 16600458 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036957109.1
tgtctggaATGCACTGAAGTAGGAACTCGGGGAGATGTCATTAATGATTCTAGGAAAATTTCATTATTTTTGTTATTAACTAAAAAGCTAAATATGATTTAATCTTGTTGTAACAAATACATAAGATACATTTCAATTCAATGAACCAATTTACGCCTAGAGGTACATTGTTTTGGAACATGTTTGTTCCTGACGCGGCATCATACCTCAGTGGGAGCGACTTGGAATTATGACGTGCTCTGTGACGTTTTTTTTTTGCTACCAGGAAACGAATGTAAACATAGCAATCGGAAGAGAAACGCGAATGCATTCGCATAATTCTACAAAAAATCTCTCGATGCTGGGTGCTAAATACGATTTTGCAGCACTGGGCGAAATGGGGTTAGCTGGAATATATGATTGCCAATTCTAGAAAAGGTTTAACGCAGTAGCTAGGACTGAGGCTGGCTAATCGCTCGATAAACCGACACACATCCACTTCGGGGTGCAGAGAATTTGCAACAAGCTGATGACATGTCGGCAGACTGTTCTTCTGCCAACCAGGAAGAACCTAATGCTGTTGTTGGAAACATATTGGTGCAGTTCATATAGGTCCAGGCATGTTTGCCATAAGGGCACCTGAGGAGGAGTCCTCAGAGATGGTGGAGGAGATGGACACGTCAGAGGCTGTCTGGTGCTGGTATTACCTAGCTGAATGTGGAGTGTGGCACATGTTTGAGATTGATCCAAGTGCTGCATGCTCTGTGACCAGTGAGCAGATAGAACAGAATTACAGCAGGAATCAACACGGTGTCATGGAGTTTTACACCGCCAAGTACACCTACAGACTGGACTTCTCAGTCATGAAGCAGATCAATGTCACAACCGGGAAACAACGGCCAATCAAACGGGCATTCCACTCTGCCACTGGCTTTAGGTTCATTTGTGATAATCTGGCCCTGCCGGTGCCCTGCCACTGGGAGAGAATAAATACAGACGAGCCTTATCAGCTCGTCTCATTGGCCAGAGATACTTATGAATTCAAGGAAGTGGTCAGACTCTATGAAAGGACCATGTGTCACCCTATCAAATCTATTCAGAGGATACAGAACCTGGATCTGTGGGAGTTCTTTTGCAGGAAAAAACAACAATTGCGCAAGATAAAGCGAGTTGTGGACATTGAGGAGAAAATGTTATTTCATGGCACAGGCCACAGCAACGTGCAGGCTATATGCACATATAACTTTGACTGGCGGCTAACTGGGAGCCATGGGGACGTCTATGGCAGAGGGAGTTATTTCGCCCGAGACGCCAAGTATTCTAGCAAATTCTGCCTTACGACGGGGAAACATAACTTTGCCTTGCAGAAGCACGGACTAGCTCCGCCGATATTTTCAAGCGAGCCTCCATATAAGACCATGTTCCTGGCCAGAGTGCTGGTCGGCGAGTCCACGTTAGGCAATCCGCTGTTCTGCCGACCGCCATCCAAGGACATGAGCTACAGCAACTTCTTTGACAGCTGTGTGGACGACCTCGCCAACCCAAAGATCTACGTCATCTTCGACTGCAACCAGATTTACCCAGAGTATCTGATTGAGTTCTACTGACGCCTATGGGGTGATCAGGGACGTTATCACACAATGTACAGGGGGtggatttttttttaccaggaCGGGATTGGGATTCAGAGACATCAGGGGAGAGGTCGAGAGAGGAGGGACTTAATGGACGGCCATGATGACTTCCCGCTGTTTGATTCCAGGCCCGACTGGGACTTGGATCATAAGATGTGCCTTAATGGATTACTATGGCAGAACAAGGAAGACCATACAAGAAGACTATGTTTCTATAAAAGCTGTAGAGTTCGTAAAGAGTGGTTTGTCTATTTACTGTGTTTAGAGACTTGTGGGTCGGAGAGGGCGAGAGGTGGCGTATTTGAAAAACAGAAAAGTAACTGCACACTGTTTGAGTGTTCCCGAAATGGATTAGCAATGTTTCAAGGCAGGATCACCTTGTGTTGTCGAAACGTTGCGAATACGTTTCGGGAGCGTTCTAACAGTGGGCaggtattatttttttattttcctttGACTGTTTGGGTCCAACATGACCATAGTCAAACAAAGCTAAAAAGTGCAACACACTTCTAATGAGGATGTAGACTGAATAACTACTTTGGTGACCAGGATGCAATAACTCACTATTACAAGTGAAGTCGCCAACATAAAGTAAACACATGTTTGACTTGCCCTACTCCTGTATACAAGGACCTGATTTCATAGATAGACATTGAATAAGTAGGTGTATctaaatgtttgactggtactgtgtataagGGATATATTCATTGTAACTGTACAGTAATCTGCTCttgtaatattttctacattgtagaataatagt
>XM_036957110.1
CGCCTAGAGGTACATTGTTTTGGAACATGTTTGTTCCTGACGCGGCATCATACCTCAGTGGGAGCGACTTGGAATTATGACGTGCTCTGTGACGTTTTTTTTTTGCTACCAGGAAACGAATGTAAACATAGCAATCGGAAGAGAAACGCGAATGCATTCGCATAATTCTACAAAAAATCTCTCGATGCTGGGTGCTAAATACGATTTTGCAGCACTGGGCGAAATGGGGTTAGCTGGAATATATGATTGCCAATTCTAGAAAAGGTTTAACGCAGTAGCTAGGACTGAGGCTGGCTAATCGCTCGATAAACCGGTCCAGGCATGTTTGCCATAAGGGCACCTGAGGAGGAGTCCTCAGAGATGGTGGAGGAGATGGACACGTCAGAGGCTGTCTGGTGCTGGTATTACCTAGCTGAATGTGGAGTGTGGCACATGTTTGAGATTGATCCAAGTGCTGCATGCTCTGTGACCAGTGAGCAGATAGAACAGAATTACAGCAGGAATCAACACGGTGTCATGGAGTTTTACACCGCCAAGTACACCTACAGACTGGACTTCTCAGTCATGAAGCAGATCAATGTCACAACCGGGAAACAACGGCCAATCAAACGGGCATTCCACTCTGCCACTGGCTTTAGGTTCATTTGTGATAATCTGGCCCTGCCGGTGCCCTGCCACTGGGAGAGAATAAATACAGACGAGCCTTATCAGCTCGTCTCATTGGCCAGAGATACTTATGAATTCAAGGAAGTGGTCAGACTCTATGAAAGGACCATGTGTCACCCTATCAAATCTATTCAGAGGATACAGAACCTGGATCTGTGGGAGTTCTTTTGCAGGAAAAAACAACAATTGCGCAAGATAAAGCGAGTTGTGGACATTGAGGAGAAAATGTTATTTCATGGCACAGGCCACAGCAACGTGCAGGCTATATGCACATATAACTTTGACTGGCGGCTAACTGGGAGCCATGGGGACGTCTATGGCAGAGGGAGTTATTTCGCCCGAGACGCCAAGTATTCTAGCAAATTCTGCCTTACGACGGGGAAACATAACTTTGCCTTGCAGAAGCACGGACTAGCTCCGCCGATATTTTCAAGCGAGCCTCCATATAAGACCATGTTCCTGGCCAGAGTGCTGGTCGGCGAGTCCACGTTAGGCAATCCGCTGTTCTGCCGACCGCCATCCAAGGACATGAGCTACAGCAACTTCTTTGACAGCTGTGTGGACGACCTCGCCAACCCAAAGATCTACGTCATCTTCGACTGCAACCAGATTTACCCAGAGTATCTGATTGAGTTCTACTGACGCCTATGGGGTGATCAGGGACGTTATCACACAATGTACAGGGGGtggatttttttttaccaggaCGGGATTGGGATTCAGAGACATCAGGGGAGAGGTCGAGAGAGGAGGGACTTAATGGACGGCCATGATGACTTCCCGCTGTTTGATTCCAGGCCCGACTGGGACTTGGATCATAAGATGTGCCTTAATGGATTACTATGGCAGAACAAGGAAGACCATACAAGAAGACTATGTTTCTATAAAAGCTGTAGAGTTCGTAAAGAGTGGTTTGTCTATTTACTGTGTTTAGAGACTTGTGGGTCGGAGAGGGCGAGAGGTGGCGTATTTGAAAAACAGAAAAGTAACTGCACACTGTTTGAGTGTTCCCGAAATGGATTAGCAATGTTTCAAGGCAGGATCACCTTGTGTTGTCGAAACGTTGCGAATACGTTTCGGGAGCGTTCTAACAGTGGGCaggtattatttttttattttcctttGACTGTTTGGGTCCAACATGACCATAGTCAAACAAAGCTAAAAAGTGCAACACACTTCTAATGAGGATGTAGACTGAATAACTACTTTGGTGACCAGGATGCAATAACTCACTATTACAAGTGAAGTCGCCAACATAAAGTAAACACATGTTTGACTTGCCCTACTCCTGTATACAAGGACCTGATTTCATAGATAGACATTGAATAAGTAGGTGTATctaaatgtttgactggtactgtgtataagGGATATATTCATTGTAACTGTACAGTAATCTGCTCttgtaatattttctacattgtagaataatagt

Function

NR:

description
poly [ADP-ribose] polymerase 11-like

GO: NA

KEGG:

id description
K15259 PARP7S; poly [ADP-ribose] polymerase 7/11/12/13

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036957109.1 False 2382 mRNA 0.44 9 16594427 16600458
XM_036957110.1 True 2104 mRNA 0.45 8 16594580 16600458

Neighbor

gene id symbol gene type direction distance location
LOC110499847 LOC106609634 coding upstream 68021 16318043 ~ 16528816 (+)
LOC110499838 LOC106609638 coding upstream 295835 16291473 ~ 16298592 (+)
copg2 copg2 coding upstream 670636 15908444 ~ 15923791 (+)
LOC110518420 LOC106593864 coding upstream 688753 15902931 ~ 15905674 (+)
LOC110490786 LOC106576567 coding upstream 705316 15870190 ~ 15889111 (+)
LOC110499844 LOC106609653 coding downstream 3801 16604259 ~ 16608641 (+)
LOC110499863 tap26 coding downstream 139911 16740369 ~ 16742407 (+)
LOC110499861 LOC106609625 coding downstream 142337 16742795 ~ 16758777 (+)
LOC110501007 LOC106576552 coding downstream 161939 16762397 ~ 16825929 (+)
LOC110501009 LOC105020375 coding downstream 313555 16914013 ~ 16973778 (+)
G1711174 NA non-coding upstream 15464 16578665 ~ 16578963 (+)
G1711152 NA non-coding upstream 69893 16523620 ~ 16524534 (+)
G1711137 NA non-coding upstream 93845 16500356 ~ 16500582 (+)
G1711136 NA non-coding upstream 94975 16499191 ~ 16499452 (+)
G1711141 NA non-coding downstream 92 16600550 ~ 16601602 (+)
G1711142 NA non-coding downstream 1274 16601732 ~ 16602382 (+)
G1711191 NA non-coding downstream 21003 16621461 ~ 16621761 (+)
G1711192 NA non-coding downstream 23182 16623640 ~ 16624039 (+)
G1711193 NA non-coding downstream 23717 16624175 ~ 16624493 (+)
G1710901 mest other upstream 658006 15931098 ~ 15936421 (+)
LOC110500994 LOC106609603 other upstream 856950 15700619 ~ 15737550 (+)
LOC110499821 LOC106609608 other upstream 1103556 15462544 ~ 15700037 (+)
G1710321 NA other upstream 1460839 15133132 ~ 15133588 (+)
G1711795 NA other downstream 119462 16719920 ~ 16720552 (+)
G1712658 NA other downstream 1065822 17666280 ~ 17668586 (+)
si:dkey-159a18.1 LOC106609576 other downstream 1665237 18247128 ~ 18268691 (+)

Expression


Co-expression Network