LOC110499844 (LOC106609653)


Basic Information

Item Value
gene id LOC110499844
gene name LOC106609653
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 16604259 ~ 16608641 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036957108.1
CAGCATTTTCAAGCAGTGCTGAACCAGGTCAGGAGTGGCAGGCGAATCTTGGATAGCTACAGTACCATTCACCTTTACTACAAAACAAAACCTCAGGAGAAGATGTGGGCTCAATCAGAAAGCAGTTCGGAAGTTGAGGACATGGACATCTCAGACATGCCTGTTATGACAGATTACAAAACAAATTCATGGCATTGGTTCTACCTGGACACGAGGGGAACGTGGCACATGTTTGAGAATGATCAAATGGAAAGAAACTCTCTGACCAGTCAGGACATTGAAAGGTATTACACAAGAAATCCAAAAGGAGTGTTACAGATATCCACATCCAGAGGCATCAACAAGCTGGATTTCGCTGAGATGGTTCTGACTGACATCAAAACAAGGAAGCAGACGCCAATCAAACGATCCAACAACACTCACAACACTGGGAATAGTGGAAGATGCTCTTGTGTTAGTCCAGTGCCCACACACTGGGAAGCGGTGGACCCCAAATACCCCTATCAGGTGTTCTGTCTGAAGAGAGACACAGCTGAATATGATTATGTGGCAGGCTGCTTAAAGGATGGAGAACTAGACAGACGCATCAAATCCATCTGTAGAATACAGAACCTGGACCTCTGGGAGTTTTACTGTAGGAAAAAGATTCAGTTGGGAAGGATTCAAGGTGTTACAGAGGTCAAGGAGGAGAAGCTGTTTCATGGAACAAAAGTCAGCAACGTACACTCTATTTGTACATACAATTTTGACAACAGGTTAGCTGGTATCAACGGCCATATTCTTGGAAAAGGTACCTACTTTGCAAAATTTGCCTCATATGCAGATAAGTACAGTCCATGGAACACTGATCCAGTACCTCTGTTTGGTGAGGCACCACAAGGCTTCAGTAGCCAAAAGACCAAAACAATGTTTCTGTGCAAGGTGATAGTTGGGAAAACTACACTGGGAAAGACAGATTACCTCAAGCCTGATGACAAAAGTGCTATCAACTTCCATGACAGTTGTGTGGACAATGTCATATATCCCAGAATTTTTGTCATATTTGATCCCAATCAGATATATCCAGAGTACTTAATTCAGTACTATTGAAATAAAGATGGAGACCGAGTGACCTACACTGAGTTGCCATGTGCAATA

Function

NR:

description
PREDICTED: poly [ADP-ribose] polymerase 11-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036957108.1 True 1137 mRNA 0.43 8 16604259 16608641

Neighbor

gene id symbol gene type direction distance location
LOC110499856 LOC106609654 coding upstream 3801 16594427 ~ 16600458 (+)
LOC110499847 LOC106609634 coding upstream 77853 16318043 ~ 16528816 (+)
LOC110499838 LOC106609638 coding upstream 305667 16291473 ~ 16298592 (+)
copg2 copg2 coding upstream 680468 15908444 ~ 15923791 (+)
LOC110518420 LOC106593864 coding upstream 698585 15902931 ~ 15905674 (+)
LOC110499863 tap26 coding downstream 131728 16740369 ~ 16742407 (+)
LOC110499861 LOC106609625 coding downstream 134154 16742795 ~ 16758777 (+)
LOC110501007 LOC106576552 coding downstream 153756 16762397 ~ 16825929 (+)
LOC110501009 LOC105020375 coding downstream 305372 16914013 ~ 16973778 (+)
LOC110516649 LOC106609628 coding downstream 393776 17002417 ~ 17063380 (+)
G1711142 NA non-coding upstream 1877 16601732 ~ 16602382 (+)
G1711141 NA non-coding upstream 2657 16600550 ~ 16601602 (+)
G1711174 NA non-coding upstream 25296 16578665 ~ 16578963 (+)
G1711152 NA non-coding upstream 79725 16523620 ~ 16524534 (+)
G1711191 NA non-coding downstream 12820 16621461 ~ 16621761 (+)
G1711192 NA non-coding downstream 14999 16623640 ~ 16624039 (+)
G1711193 NA non-coding downstream 15534 16624175 ~ 16624493 (+)
G1711194 NA non-coding downstream 17204 16625845 ~ 16626051 (+)
G1710901 mest other upstream 667838 15931098 ~ 15936421 (+)
LOC110500994 LOC106609603 other upstream 866782 15700619 ~ 15737550 (+)
LOC110499821 LOC106609608 other upstream 1113388 15462544 ~ 15700037 (+)
G1710321 NA other upstream 1470671 15133132 ~ 15133588 (+)
G1711795 NA other downstream 111279 16719920 ~ 16720552 (+)
G1712658 NA other downstream 1057639 17666280 ~ 17668586 (+)
si:dkey-159a18.1 LOC106609576 other downstream 1657054 18247128 ~ 18268691 (+)

Expression


Co-expression Network