Item | Value |
---|---|
gene id | LOC110499861 |
gene name | LOC106609625 |
gene type | coding |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048585.1 |
NCBI id | CM023239.2 |
chromosome length | 64935962 |
location | 16742795 ~ 16758777 (+) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
description |
---|
PREDICTED: ras and EF-hand domain-containing protein homolog isoform X1 |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
XM_036957113.1 | False | 3885 | mRNA | 0.50 | 18 | 16742795 | 16758777 |
XM_036957114.1 | False | 3938 | mRNA | 0.49 | 18 | 16742795 | 16758777 |
XM_036957115.1 | False | 3783 | mRNA | 0.49 | 18 | 16742795 | 16758777 |
XR_005038540.1 | True | 3940 | mRNA | 0.50 | 18 | 16742795 | 16758777 |
16,730,000
16,732,000
16,734,000
16,736,000
16,738,000
16,740,000
16,742,000
16,744,000
16,746,000
16,748,000
16,748,000
16,750,000
16,752,000
16,754,000
16,756,000
16,758,000
16,760,000
16,762,000
16,764,000
16,766,000
NC_048585.1
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
LOC110499863 | tap26 | coding | upstream | 396 | 16740369 ~ 16742407 (+) |
LOC110499844 | LOC106609653 | coding | upstream | 134154 | 16604259 ~ 16608641 (+) |
LOC110499856 | LOC106609654 | coding | upstream | 142337 | 16594427 ~ 16600458 (+) |
LOC110499847 | LOC106609634 | coding | upstream | 216389 | 16318043 ~ 16528816 (+) |
LOC110499838 | LOC106609638 | coding | upstream | 444203 | 16291473 ~ 16298592 (+) |
LOC110501007 | LOC106576552 | coding | downstream | 3620 | 16762397 ~ 16825929 (+) |
LOC110501009 | LOC105020375 | coding | downstream | 155236 | 16914013 ~ 16973778 (+) |
LOC110516649 | LOC106609628 | coding | downstream | 243640 | 17002417 ~ 17063380 (+) |
LOC110499865 | LOC106576572 | coding | downstream | 330192 | 17088969 ~ 17247292 (+) |
LOC110501011 | LOC105020379 | coding | downstream | 513228 | 17272005 ~ 17319991 (+) |
G1711194 | NA | non-coding | upstream | 116744 | 16625845 ~ 16626051 (+) |
G1711193 | NA | non-coding | upstream | 118302 | 16624175 ~ 16624493 (+) |
G1711192 | NA | non-coding | upstream | 118756 | 16623640 ~ 16624039 (+) |
G1711191 | NA | non-coding | upstream | 121034 | 16621461 ~ 16621761 (+) |
G1711804 | NA | non-coding | downstream | 42 | 16758819 ~ 16759573 (+) |
G1711808 | LOC106576486 | non-coding | downstream | 2657 | 16761434 ~ 16763632 (+) |
G1711809 | NA | non-coding | downstream | 7976 | 16766753 ~ 16768908 (+) |
G1711836 | NA | non-coding | downstream | 82495 | 16841272 ~ 16841488 (+) |
G1711837 | NA | non-coding | downstream | 83462 | 16842239 ~ 16842448 (+) |
G1711795 | NA | other | upstream | 22243 | 16719920 ~ 16720552 (+) |
G1710901 | mest | other | upstream | 806374 | 15931098 ~ 15936421 (+) |
LOC110500994 | LOC106609603 | other | upstream | 1005318 | 15700619 ~ 15737550 (+) |
G1712658 | NA | other | downstream | 907503 | 17666280 ~ 17668586 (+) |
si:dkey-159a18.1 | LOC106609576 | other | downstream | 1506918 | 18247128 ~ 18268691 (+) |
G1713262 | NA | other | downstream | 1738370 | 18497147 ~ 18500874 (+) |
G1713384 | NA | other | downstream | 1976014 | 18734791 ~ 18737436 (+) |