LOC118942893 (LOC105020372)


Basic Information

Item Value
gene id LOC118942893
gene name LOC105020372
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 16758800 ~ 16777177 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036957116.1
AATCCTGCGAAAGTCGAGAAGTACGGCAATTGGTCCGCTATATACAGCATCTCTCTATATTCTGCCGGAAAATCTGTTGTGAAGGTGAAGAGAGGCATCTGGCGCGTGGGAGCCATCGATTTATAACTTCTGATCACGAGCCGGTTCTTGGAAAAACGGGTGCCTGACTGCCTGTAAAACCGTAATGAACAACTCCAACTCAATACTCAAGTTCAACTTTTGCCATGGGAACGTAGCCAAGTCAAACGGAGGATAGCGCATCCTTCTCCGAATATAAATATCACTGATGGGGCGATTTCAAGCCAACGACTTGTGAGATCTGTTGATAGACGTGGAAAAAAACTGTTGAGGAGAAGCCGAGTATGAGGATGTATTTTCCTAACGTGGACTACAGGCATCTTGGTATAGTTTGCTTGCATCATAGACATATGTTGCAGTGcgcaagaggagagaggaaggttaTTTCGGGGTGCTGGTGTATTTGATGCCCAAGTGCCTCTATAGGAACCACCTGTAACTTTTACAAAATGGATACCTGTCGTTTTTATCGATGTGAAACAAACGTTTTAGAAGAGCATGATAACTTTTTAGGGGGATAACAATAAGTTAGAATTTAGCCTAAAATATTTAGTATTTCCGATATTAAACGTTTGCATCATTTATGAAAGTCAATCTAGAGAAAATAAATCTAGCTCATCGAAAGAGAGCTACTAAGTTTATTTTATATACGATTTTTCCCTCCCTGGGTTGAAGAAATCTCGTTGGCTCATATGGGACTGAGGCACTCGCGTTGCCTGCTCCTACGGAGAAAAATGGCGGAGCCGGACAATTCTGAGcGGCAGTGTACCATCACTACCCCCCAGTCGCAGTCCTTTCAGCCTGCCTCCTTGCCCAAACCTGTGCCAACTGTCCACCATGTGCCACACCCTCCACATACGCCCCATGTAGCGGCCCTTCCCACCTGCCCCGGGCGCGGCAAGATGGCAAAGCTGCTCAACCCAGAGGAAATGACATCACAGGACTACTACTTTGACTCCTATGCCCACTTTGGCATCCATGAGGAGATGCTGAAGGATGAAGTACGGACCCTGACCTATAGGAATGCCATGTACCACAACAAGCACATGTTCAAGGACAAGATAGTTCTGGACGTGGGCAGTGGGACAGGCATCCTGTCCATGTTCGCTGCCAACGCGGGCGCCAGGCACGTGTACGGGATTGAGTGTTCAAGTATATCAGAGTATTCTGAGAAGATCATCAAGTCCAACCACCTACACAATGTCATCACTATCTTCAATgggaaggtggaggaggtggaactGCCAGTGGAGAAAGTAGACATCATCATCTCAGAGTGGATGGGCTACTGTCTCTTCTACGAGTCTATGCTCAATACGGTCATCTTCGCCAGGGACAAATGGCTAAAGCCTGGAGGGCTGATGTTTCCTGACAGGGCTGCTCTGTATGTGGTGGCCATCGAGGACAGGCAGTACAAGGACTTCAAGATACACTggtgGGAGAACGTGTACGGTTTTGACATGACCTGCATCCGTAACGTGGCCATGAGAGAGCCCCTGGTGGACGTGGTGGACCCCAAACAGGTGGTGACCAACTCCTGCCTAGTcaagGAAGTGGACATCTACACGGTGAAGCCTGAGGACCTGTCTTTCACCACGGCCTTCTGCCTGCAGATCCAGAGGAACGACTATGTCCACGCCATGGTCACCTACTTCAACATCGAGTTCACCAAGTGTCATAAGAAGACTGGCTTCTCTACCGCTCCTGACGCCGCCAGTACCCACTGGAAGCAGACAGTGTTTTACCTGGAGGACTACCTGACtgtgaggaagggagaggagatacTGGGCAGCATCGCAGTCAAGCCCAACGATAAGAACGTGCGGGACCTGGAGTTCACCTTGGAGTTGGACTTTAAAGGACAGCTGTGTGATGCGGCCATTTCCCACGACTACAAGATGCGCTAGCTGACCAGCAAAGGGCGATATCCCCCTCCTTGAGAGGGAGGGCACAGGCTCTCCATCAGGCCCTCTTATTGGTCCGAGGGGGACACAATACGCATCTGATTGGATGACAGCGCTCCAGCACCTAAGTGATGTCATAAAAACAAGCCATTTCGAAGCAATAGCGCCATCACCTGCCACATTTTTAAAGCTGCCCTGAGAATGTAATATCCCTGATGAACttgatttgttatttttttcagGTTGAGTTTCAGTGTTATCAGTACTAGAGCTAAAGGAGTTATAGGGATTTTAGATGCCAGTCCAGAGGCACTTTAAGGACAAACTCTGAGCATGTCTTTTATCAAGGAAAACAGACAAGCTGTTTTACAGCTGTCTTTCAAAGTTCAACGAATGCAGAACCCTAAGAGTTTAACAGGAAAGTCATTCAGTGTTTGTTCAAGTTAGTTATATTTTGTTGGTTTTCAGTACTGGTAAGTTATGTAGCATGTTTAGCTTTTTGTTCTTGGTTGATTTCAAGTATCATGATTTGATCATTTGAGATATTCACAATTGCTAATGGAACGTGTTTAATGATAGAAACCTGTGAGAaatgtcttgtcttccatctcCAGCTGGAAGTTATTTAGCCATTTTGATTTTGGGGTGTGGTGTAGGAGTGATGAACAAATAAAGAACATTTACTTAGAA
>XM_036957117.1
CGGTGGGAAATCCTGCGAAAGTCGAGAAGTACGGCAATTGGTCCGCTATATACAGCATCTCTCTATATTCTGCCGGAAAATCTGTTGTGAAGGTGAAGAGAGGCATCTGGCGCGTGGGAGCCATCGATTTATAACTTCTGATCACGAGCCGGTTCTTGGAAAAACGGGTGCCTGACTGCCTGTAAAACCGTAATGAACAACTCCAACTCAATACTCAAGTTCAACTTTTGCCATGGGAACGTAGCCAAGTCAAACGGAGGATAGCGCATCCTTCTCCGAATATAAATATCACTGATGGGGCGATTTCAAGCCAACGACTTGTGAGATCTGTTGATAGACGTGGAAAAAAACTGTTGAGGAGAAGCCGAGTATGAGGATGTATTTTCCTAACGTGGACTACAGGCATCTTGGTATAGTTTGCTTGCATCATAGACATATGTTGCAGTGcgcaagaggagagaggaaggttaTTTCGGGGTGCTGGTGTATTTGATGCCCAAGTGCCTCTATAGGAACCACCTGTAACTTTTACAAAATGGATACCTGTCGTTTTTATCGATGTGAAACAAACGTTTTAGAAGAGCATGATAACTTTTTAGGGGGATAACAATAAGTTAGAATTTAGCCTAAAATATTTAGTATTTCCGATATTAAACGTTTGCATCATTTATGAAAGTCAATCTAGAGAAAATAAATCTAGCTCATCGAAAGAGAGCTACTAAGTTTATTTTATATACGATTTTTCCCTCCCTGGGTTGAAGAAATCTCGTTGGCTCATATGGGACTGAGGCACTCGCGTTGCCTGCTCCTACGGAGAAAAATGGCGGAGCCGGACAATTCTGAGcGGCAGTGTACCATCACTACCCCCCAGTCGCAGTCCTTTCAGCCTGCCTCCTTGCCCAAACCTGTGCCAACTGTCCACCATGTGCCACACCCTCCACATACGCCCCATGTAGCGGCCCTTCCCACCTGCCCCGGGCGCGGCAAGATGGCAAAGCTGCTCAACCCAGAGGAAATGACATCACAGGACTACTACTTTGACTCCTATGCCCACTTTGGCATCCATGAGGAGATGCTGAAGGATGAAGTACGGACCCTGACCTATAGGAATGCCATGTACCACAACAAGCACATGTTCAAGGACAAGATAGTTCTGGACGTGGGCAGTGGGACAGGCATCCTGTCCATGTTCGCTGCCAACGCGGGCGCCAGGCACGTGTACGGGATTGAGTGTTCAAGTATATCAGAGTATTCTGAGAAGATCATCAAGTCCAACCACCTACACAATGTCATCACTATCTTCAATgggaaggtggaggaggtggaactGCCAGTGGAGAAAGTAGACATCATCATCTCAGAGTGGATGGGCTACTGTCTCTTCTACGAGTCTATGCTCAATACGGTCATCTTCGCCAGGGACAAATGGCTACCTGGAGGGCTGATGTTTCCTGACAGGGCTGCTCTGTATGTGGTGGCCATCGAGGACAGGCAGTACAAGGACTTCAAGATACACTggtgGGAGAACGTGTACGGTTTTGACATGACCTGCATCCGTAACGTGGCCATGAGAGAGCCCCTGGTGGACGTGGTGGACCCCAAACAGGTGGTGACCAACTCCTGCCTAGTcaagGAAGTGGACATCTACACGGTGAAGCCTGAGGACCTGTCTTTCACCACGGCCTTCTGCCTGCAGATCCAGAGGAACGACTATGTCCACGCCATGGTCACCTACTTCAACATCGAGTTCACCAAGTGTCATAAGAAGACTGGCTTCTCTACCGCTCCTGACGCCGCCAGTACCCACTGGAAGCAGACAGTGTTTTACCTGGAGGACTACCTGACtgtgaggaagggagaggagatacTGGGCAGCATCGCAGTCAAGCCCAACGATAAGAACGTGCGGGACCTGGAGTTCACCTTGGAGTTGGACTTTAAAGGACAGCTGTGTGATGCGGCCATTTCCCACGACTACAAGATGCGCTAGCTGACCAGCAAAGGGCGATATCCCCCTCCTTGAGAGGGAGGGCACAGGCTCTCCATCAGGCCCTCTTATTGGTCCGAGGGGGACACAATACGCATCTGATTGGATGACAGCGCTCCAGCACCTAAGTGATGTCATAAAAACAAGCCATTTCGAAGCAATAGCGCCATCACCTGCCACATTTTTAAAGCTGCCCTGAGAATGTAATATCCCTGATGAACttgatttgttatttttttcagGTTGAGTTTCAGTGTTATCAGTACTAGAGCTAAAGGAGTTATAGGGATTTTAGATGCCAGTCCAGAGGCACTTTAAGGACAAACTCTGAGCATGTCTTTTATCAAGGAAAACAGACAAGCTGTTTTACAGCTGTCTTTCAAAGTTCAACGAATGCAGAACCCTAAGAGTTTAACAGGAAAGTCATTCAGTGTTTGTTCAAGTTAGTTATATTTTGTTGGTTTTCAGTACTGGTAAGTTATGTAGCATGTTTAGCTTTTTGTTCTTGGTTGATTTCAAGTATCATGATTTGATCATTTGAGATATTCACAATTGCTAATGGAACGTGTTTAATGATAGAAACCTGTGAGAaatgtcttgtcttccatctcCAGCTGGAAGTTATTTAGCCATTTTGATTTTGGGGTGTGGTGTAGGAGTGATGAACAAATAAAGAACATTTACTTAGAA
>TU1961366
GACTGCCTGTAAAACCGTAATGAACAACTCCAACTCAATACTCAAGTTCAACTTTTGCCATGGGAACGTAGCCAAGTCAAACGGAGGATAGCGCATCCTTCTCCGAATATAAATATCACTGATGGGGCGATTTCAAGCCAACGACTTGTGAGATCTGTTGATAGACGTGGAAAAAAACTGTTGAGGAGAAGCCGAGTATGAGGATGTATTTTCCTAACGTGGACTACAGGCATCTTGGTATAGTTTGCTTGCATCATAGACATATGTTGCAGTGcgcaagaggagagaggaaggttaTTTCGGGGTGCTGGTGTATTTGATGCCCAAGTGCCTCTATAGGAACCACCTGTAACTTTTACAAAATGGATACCTGTCGTTTTTATCGATGTGAAACAAACGTTTTAGAAGAGCATGATAACTTTTTAGGGGGATAACAATAAGTTAGAATTTAGCCTAAAATATTTAGTATTTCCGATATTAAACGTTTGCATCATTTATGAAAGTCAATCTAGAGAAAATAAATCTAGCTCATCGAAAGAGAGCTACTAAGTTTATTTTATATACGATTTTTCCCTCCCTGGGTTGAAGAAATCTCGTTGGCTCATATGGGACTGAGGCACTCGCGTTGCCTGCTCCTACGGAGAAAAATGGCGGAGCCGGACAATTCTGAGcGGCAGTGTACCATCACTACCCCCCAGTCGCAGTCCTTTCAGCCTGCCTCCTTGCCCAAACCTGTGCCAACTGTCCACCATGTGCCACACCCTCCACATACGCCCCATGTAGCGGCCCTTCCCACCTGCCCCGGGCGCGGCAAGATGGCAAAGCTGCTCAACCCAGAGGAAATGACATCACAGGACTACTACTTTGACTCCTATGCCCACTTTGGCATCCATGAGGAGATGCTGAAGGATGAAGTACGGACCCTGACCTATAGGAATGCCATGTACCACAACAAGCACATGTTCAAGGACAAGATAGTTCTGGACGTGGGCAGTGGGACAGGCATCCTGTCCATGTTCGCTGCCAACGCGGGCGCCAGGCACGTGTACGGGATTGAGTGTTCAAGTATATCAGAGTATTCTGAGAAGATCATCAAGTCCAACCACCTACACAATGTCATCACTATCTTCAATgggaaggtggaggaggtggaactGCCAGTGGAGAAAGTAGACATCATCATCTCAGAGTGGATGGGCTACTGTCTCTTCTACGAGTCTATGCTCAATACGGTCATCTTCGCCAGGGACAAATGGCTAAAGCCTGGAGGGCTGATGTTTCCTGACAGGGCTGCTCTGTATGTGGTGGCCATCGAGGACAGGCAGTACAAGGACTTCAAGATACACTG

Function

NR:

description
PREDICTED: protein arginine N-methyltransferase 8-B isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036957116.1 False 2672 mRNA 0.47 10 16758800 16777169
XM_036957117.1 False 2677 mRNA 0.47 10 16758800 16777177
TU1961366 True 1348 TUCP 0.47 6 16765800 16777004

Neighbor

gene id symbol gene type direction distance location
LOC110501003 LOC106576525 coding downstream 18497 16719898 ~ 16740303 (-)
LOC110499846 LOC106576554 coding downstream 58233 16613901 ~ 16700567 (-)
LOC110499843 LOC105020363 coding downstream 165588 16573934 ~ 16593212 (-)
LOC110514342 LOC106609637 coding downstream 212622 16530059 ~ 16546178 (-)
LOC118936578 st8sia1 coding downstream 474453 16259629 ~ 16284347 (-)
LOC110499869 NA coding upstream 404269 17181446 ~ 17187956 (-)
LOC110518924 LOC106576509 coding upstream 545470 17322647 ~ 17325861 (-)
LOC110499875 LOC106576481 coding upstream 698958 17476135 ~ 17481386 (-)
LOC110499880 LOC106576467 coding upstream 1352922 18130099 ~ 18134351 (-)
LOC110499883 LOC106576497 coding upstream 1426362 18203539 ~ 18232189 (-)
G1711946 NA non-coding downstream 16396 16742104 ~ 16742404 (-)
G1711788 NA non-coding downstream 48498 16709962 ~ 16710302 (-)
G1711749 NA non-coding downstream 108699 16649685 ~ 16650101 (-)
G1711723 NA non-coding downstream 146140 16612215 ~ 16612660 (-)
G1711967 NA non-coding upstream 15024 16792201 ~ 16795933 (-)
G1711970 NA non-coding upstream 23114 16800291 ~ 16809851 (-)
G1711971 NA non-coding upstream 28026 16805203 ~ 16811114 (-)
G1711976 LOC106576551 non-coding upstream 37918 16815095 ~ 16837791 (-)
G1711974 NA non-coding upstream 46797 16823974 ~ 16825901 (-)
G1711947 LOC106609625 other downstream 12936 16742840 ~ 16745864 (-)
G1711655 LOC106609634 other downstream 317662 16439773 ~ 16441138 (-)
G1711339 NA other downstream 1020282 15736992 ~ 15738518 (-)
G1712050 NA other upstream 225437 17002614 ~ 17003700 (-)
G1712424 NA other upstream 518342 17295519 ~ 17295735 (-)
G1713604 NA other upstream 1693336 18470513 ~ 18470817 (-)
G1713637 NA other upstream 1817427 18519287 ~ 18605517 (-)
G1713719 NA other upstream 1891657 18668834 ~ 18669325 (-)

Expression


Co-expression Network