Item | Value |
---|---|
gene id | LOC110499893 |
gene name | LOC106576462 |
gene type | coding |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048585.1 |
NCBI id | CM023239.2 |
chromosome length | 64935962 |
location | 18621177 ~ 18628411 (+) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
description |
---|
keratocan-like |
id | name | namespace |
---|---|---|
GO:0030199 | collagen fibril organization | biological_process |
GO:0007601 | visual perception | biological_process |
id | description |
---|---|
K08123 | KERA; keratocan |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
XM_036957151.1 | False | 2283 | mRNA | 0.47 | 4 | 18621177 | 18628411 |
XM_021576950.2 | True | 2596 | mRNA | 0.47 | 3 | 18623969 | 18628411 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
LOC110499892 | lum | coding | upstream | 3373 | 18613683 ~ 18617804 (+) |
LOC100301653 | LOC100301653 | coding | upstream | 24418 | 18567868 ~ 18596759 (+) |
LOC110499888 | LOC106609036 | coding | upstream | 105144 | 18511675 ~ 18516033 (+) |
LOC110499881 | LOC106576460 | coding | upstream | 246547 | 18366267 ~ 18374630 (+) |
LOC110499882 | LOC106576502 | coding | upstream | 330978 | 18270787 ~ 18290199 (+) |
LOC110499894 | LOC106609040 | coding | downstream | 2232 | 18630643 ~ 18654262 (+) |
si:ch211-244b2.3 | LOC106609042 | coding | downstream | 43502 | 18671875 ~ 18683306 (+) |
fut9 | fut9 | coding | downstream | 90897 | 18719308 ~ 18720592 (+) |
LOC110499900 | LOC106596632 | coding | downstream | 98286 | 18726697 ~ 18734052 (+) |
LOC110499901 | LOC106609586 | coding | downstream | 111975 | 18740386 ~ 18754645 (+) |
G1713332 | NA | non-coding | upstream | 8548 | 18612387 ~ 18612629 (+) |
G1713324 | NA | non-coding | upstream | 34510 | 18586072 ~ 18586667 (+) |
G1713233 | NA | non-coding | upstream | 102809 | 18517739 ~ 18518368 (+) |
G1713287 | NA | non-coding | upstream | 116857 | 18502266 ~ 18504320 (+) |
G1713285 | NA | non-coding | upstream | 129164 | 18491635 ~ 18492013 (+) |
G1713351 | NA | non-coding | downstream | 31944 | 18660355 ~ 18660684 (+) |
G1713352 | NA | non-coding | downstream | 34761 | 18663172 ~ 18663507 (+) |
G1713331 | NA | non-coding | downstream | 40560 | 18668971 ~ 18669328 (+) |
G1713343 | scyl2 | non-coding | downstream | 54997 | 18683408 ~ 18686424 (+) |
G1713262 | NA | other | upstream | 120303 | 18497147 ~ 18500874 (+) |
si:dkey-159a18.1 | LOC106609576 | other | upstream | 353669 | 18247128 ~ 18268691 (+) |
G1712658 | NA | other | upstream | 952591 | 17666280 ~ 17668586 (+) |
LOC110501009 | LOC105020375 | other | upstream | 1677388 | 16914013 ~ 16973778 (+) |
LOC110499863 | tap26 | other | upstream | 1879959 | 16740369 ~ 16742407 (+) |
G1713384 | NA | other | downstream | 106380 | 18734791 ~ 18737436 (+) |
G1714090 | NA | other | downstream | 756561 | 19384972 ~ 19754609 (+) |
nmes1 | nmes1 | other | downstream | 1480787 | 20109125 ~ 20113891 (+) |
G1715392 | NA | other | downstream | 1930011 | 20558422 ~ 20558751 (+) |
LOC110499980 | LOC106576426 | other | downstream | 2370187 | 20954576 ~ 21004439 (+) |