Gene
RNA
| Item | Value |
|---|---|
| gene id | fut9 |
| gene name | fut9 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 18719308 ~ 18720592 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| symbol | description |
|---|---|
| fut9 | Enables 4-galactosyl-N-acetylglucosaminide 3-alpha-L-fucosyltransferase activity. Involved in several processes, including fucosylation; positive regulation of neuron projection development; and regulation of leukocyte tethering or rolling. Located in trans-Golgi network membrane. |
| description |
|---|
| fucosyltransferase 9 |
| id | name | namespace |
|---|---|---|
| GO:0036065 | fucosylation | biological_process |
| GO:0006486 | protein glycosylation | biological_process |
| GO:0032580 | Golgi cisterna membrane | cellular_component |
| GO:0016021 | integral component of membrane | cellular_component |
| GO:0008417 | fucosyltransferase activity | molecular_function |
| id | description |
|---|---|
| K00753 | E2.4.1.214; glycoprotein 3-alpha-L-fucosyltransferase |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| NM_001124400.1 | True | 1146 | mRNA | 0.46 | 5 | 18719308 | 18720592 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| si:ch211-244b2.3 | LOC106609042 | coding | upstream | 36002 | 18671875 ~ 18683306 (+) |
| LOC110499894 | LOC106609040 | coding | upstream | 65046 | 18630643 ~ 18654262 (+) |
| LOC110499893 | LOC106576462 | coding | upstream | 90897 | 18621177 ~ 18628411 (+) |
| LOC110499892 | lum | coding | upstream | 101504 | 18613683 ~ 18617804 (+) |
| LOC100301653 | LOC100301653 | coding | upstream | 122549 | 18567868 ~ 18596759 (+) |
| LOC110499900 | LOC106596632 | coding | downstream | 6105 | 18726697 ~ 18734052 (+) |
| LOC110499901 | LOC106609586 | coding | downstream | 19794 | 18740386 ~ 18754645 (+) |
| LOC110499903 | LOC106609567 | coding | downstream | 37867 | 18758459 ~ 18770532 (+) |
| LOC110499902 | LOC106609566 | coding | downstream | 49656 | 18770248 ~ 18840460 (+) |
| LOC110501017 | LOC106609562 | coding | downstream | 502845 | 19223437 ~ 19226634 (+) |
| G1713372 | NA | non-coding | upstream | 10207 | 18708772 ~ 18709101 (+) |
| G1713369 | NA | non-coding | upstream | 13887 | 18705155 ~ 18705421 (+) |
| G1713368 | NA | non-coding | upstream | 14860 | 18703644 ~ 18704448 (+) |
| G1713366 | NA | non-coding | upstream | 20171 | 18697279 ~ 18699137 (+) |
| G1713365 | scyl2 | non-coding | upstream | 23185 | 18695904 ~ 18696123 (+) |
| G1713379 | NA | non-coding | downstream | 3461 | 18724053 ~ 18724458 (+) |
| G1713384 | NA | non-coding | downstream | 14199 | 18734791 ~ 18737436 (+) |
| G1713385 | NA | non-coding | downstream | 17038 | 18737630 ~ 18738946 (+) |
| G1713386 | NA | non-coding | downstream | 18914 | 18739506 ~ 18740125 (+) |
| G1713421 | NA | non-coding | downstream | 103872 | 18824464 ~ 18825189 (+) |
| G1713262 | NA | other | upstream | 218434 | 18497147 ~ 18500874 (+) |
| si:dkey-159a18.1 | LOC106609576 | other | upstream | 451800 | 18247128 ~ 18268691 (+) |
| G1712658 | NA | other | upstream | 1050722 | 17666280 ~ 17668586 (+) |
| LOC110501009 | LOC105020375 | other | upstream | 1775519 | 16914013 ~ 16973778 (+) |
| LOC110499863 | tap26 | other | upstream | 1978090 | 16740369 ~ 16742407 (+) |
| G1714090 | NA | other | downstream | 664380 | 19384972 ~ 19754609 (+) |
| nmes1 | nmes1 | other | downstream | 1388606 | 20109125 ~ 20113891 (+) |
| G1715392 | NA | other | downstream | 1837830 | 20558422 ~ 20558751 (+) |
| LOC110499980 | LOC106576426 | other | downstream | 2278006 | 20954576 ~ 21004439 (+) |
