bik (LOC106609559)


Basic Information

Item Value
gene id bik
gene name LOC106609559
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 19302368 ~ 19306083 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036957187.1
CCCTCTAGTGGTTGTTGAGAGAAACACTCCTCAAGGATCTTCCTGGTGTAACTGCCATAGGCGTGGCTGTTGAAATGATAATTGTGGCAGTTACCTGAAAACAACAAGATTAAAGGACGCTGCTGGCGGCGTCTACTTTAATCTACAAAATAGAAAACAAAATGGTGGAGCACAGAAGAGAGCGACGCCGTGCCATTTCCCTCAGGGCTGGACCTAGTGAGGTGGACAACGTCACCCTGTCTGATGTGAATCTCAGGATCCATGCCAGGGCTGCCCGGGCTACGGGTCGTCAGCTGGCAGAGATGGGTGACAGACTGGACCGTGAATGGGCAGAGAGACTCCCTAATCAGTGGCCTGTGCCACAAACTCTCCATGTGACAAGTCCTGCCCATGCCCTGACTAGAAGCATCTACAGGGGGATACAAGGACAGCTTTGGGGAGTGAAGAATTTGCCCGGCGTGGCCAAAGCCTGGTTGTCCTCCTCTGTCCACAGGCAGGCTACACAGAGAGCAGAGGCTTGGGTAGCCTGGGTTTCCAGTATTGAACCTCCTAACTACCCTGGTTGGGCCAAAGCGACGCTTGCCACTGTGGCACTGGTGGCCACGGCAACCATTTGCACTGCATTGTGGAAGGAGTAGAAAGGCTAACCATTGCACTGAGGGGTCCTTGAGCTGGACTTCTGGCTACAATGTTCTGTGTTAGACAATTTCCTAATTGAGTGAGATTTTTAAGCAATTTTTACTATAGACTTTAATttaagaaataaataaatacagtgtgttattgAATTGATTGTGCTGGATCACGGTTTTTATACTCTTATCAACTAATGCATGTTTTAAAGACTGTTGCTGGTCTGCAGTATTTATGAGGATTGGGCCTGTTACTGGTTAGACATTTAATTGCCACAACTATCTTATGTAGCTTATAACACCATTAAATGGAAGttggaaaaatattttttaatgacTTGAGGAAAAAATTAAACTTGAGAAAAACCAAA
>XM_036957188.1
GGAACATTATAAACAACTGTGAAATGTTcaaaatatttttatatttagGATATTGTTCTATAATGCCCATATCATTTGCGTTACAGGGCGGCGTCTACTTTAATCTACAAAATAGAAAACAAAATGGTGGAGCACAGAAGAGAGCGACGCCGTGCCATTTCCCTCAGGGCTGGACCTAGTGAGGTGGACAACGTCACCCTGTCTGATGTGAATCTCAGGATCCATGCCAGGGCTGCCCGGGCTACGGGTCGTCAGCTGGCAGAGATGGGTGACAGACTGGACCGTGAATGGGCAGAGAGACTCCCTAATCAGTGGCCTGTGCCACAAACTCTCCATGTGACAAGTCCTGCCCATGCCCTGACTAGAAGCATCTACAGGGGGATACAAGGACAGCTTTGGGGAGTGAAGAATTTGCCCGGCGTGGCCAAAGCCTGGTTGTCCTCCTCTGTCCACAGGCAGGCTACACAGAGAGCAGAGGCTTGGGTAGCCTGGGTTTCCAGTATTGAACCTCCTAACTACCCTGGTTGGGCCAAAGCGACGCTTGCCACTGTGGCACTGGTGGCCACGGCAACCATTTGCACTGCATTGTGGAAGGAGTAGAAAGGCTAACCATTGCACTGAGGGGTCCTTGAGCTGGACTTCTGGCTACAATGTTCTGTGTTAGACAATTTCCTAATTGAGTGAGATTTTTAAGCAATTTTTACTATAGACTTTAATttaagaaataaataaatacagtgtgttattgAATTGATTGTGCTGGATCACGGTTTTTATACTCTTATCAACTAATGCATGTTTTAAAGACTGTTGCTGGTCTGCAGTATTTATGAGGATTGGGCCTGTTACTGGTTAGACATTTAATTGCCACAACTATCTTATGTAGCTTATAACACCATTAAATGGAAGttggaaaaatattttttaatgacTTGAGGAAAAAATTAAACTTGAGAAAAACCAAA

Function

NR:

description
PREDICTED: uncharacterized protein LOC106609559

GO:

id name namespace
GO:0043280 positive regulation of cysteine-type endopeptidase activity involved in apoptotic process biological_process
GO:0043065 positive regulation of apoptotic process biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036957187.1 False 1003 mRNA 0.46 6 19302368 19306083
XM_036957188.1 True 965 mRNA 0.44 5 19302499 19306083

Neighbor

gene id symbol gene type direction distance location
LOC118942896 NA coding upstream 23333 19260745 ~ 19279035 (+)
LOC110501017 LOC106609562 coding upstream 75734 19223437 ~ 19226634 (+)
LOC110499902 LOC106609566 coding upstream 461908 18770248 ~ 18840460 (+)
LOC110499903 LOC106609567 coding upstream 531836 18758459 ~ 18770532 (+)
LOC110499901 LOC106609586 coding upstream 547723 18740386 ~ 18754645 (+)
LOC110499913 NA coding downstream 25881 19331964 ~ 19337651 (+)
LOC118942905 NA coding downstream 78909 19384992 ~ 19388072 (+)
LOC110499932 NA coding downstream 119310 19425393 ~ 19431499 (+)
LOC118942906 NA coding downstream 403131 19709214 ~ 19709762 (+)
LOC110499917 LOC106576387 coding downstream 436041 19742124 ~ 19752304 (+)
G1714066 LOC106576374 non-coding upstream 139 19300825 ~ 19302229 (+)
G1714035 NA non-coding upstream 67314 19234838 ~ 19235054 (+)
G1714034 NA non-coding upstream 68011 19234125 ~ 19234357 (+)
G1713953 NA non-coding upstream 126199 19174107 ~ 19176169 (+)
G1713990 NA non-coding upstream 141560 19160285 ~ 19160808 (+)
G1714074 NA non-coding downstream 15306 19321389 ~ 19321643 (+)
G1714087 NA non-coding downstream 34815 19340898 ~ 19341419 (+)
G1714082 NA non-coding downstream 47797 19353880 ~ 19354892 (+)
G1714126 LOC106609549 non-coding downstream 54103 19360186 ~ 19360889 (+)
G1714133 NA non-coding downstream 80366 19386449 ~ 19433764 (+)
G1713384 NA other upstream 564932 18734791 ~ 18737436 (+)
G1713262 NA other upstream 801494 18497147 ~ 18500874 (+)
si:dkey-159a18.1 LOC106609576 other upstream 1034860 18247128 ~ 18268691 (+)
G1712658 NA other upstream 1633782 17666280 ~ 17668586 (+)
LOC110501009 LOC105020375 other upstream 2358579 16914013 ~ 16973778 (+)
G1714090 NA other downstream 78889 19384972 ~ 19754609 (+)
nmes1 nmes1 other downstream 803115 20109125 ~ 20113891 (+)
G1715392 NA other downstream 1252339 20558422 ~ 20558751 (+)
LOC110499980 LOC106576426 other downstream 1692515 20954576 ~ 21004439 (+)
G1717161 LOC106576319 other downstream 2869880 22175963 ~ 22180897 (+)

Expression


Co-expression Network