LOC110501020 (LOC106609550)


Basic Information

Item Value
gene id LOC110501020
gene name LOC106609550
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 19337875 ~ 19348263 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036958465.1
ATGCCGGAAGagtgcctcagcgacctggagaGCAGGGGCACTGCCTTCGCTGAGTACAGTGACTTCCATCTGGGCACGGAGAAGGAGGCCTATAAGCTGAACGTTGGAGCCTACAGGGGCAACGCAGGTGACGCCATTCGTGGGGAAAACGCCGGCATTGACCAGTATGGCTTTGGCTTCAGCACAACTGACAAGGACAATGACGGCTGCTCGCCCTGCATCTTTGGAGACATCGCCGAGAACACATGCAGCTTctcggagggaggaggagggtggtggtacAGTCGCTGTGGCTCTGCCATCCTGAACGGAGACTGGCACCCCGCCGGCGAACACATCGGCTGGGCCTCCGGCCTCCACTGGGAGACCTGGAAAGGACCTGCTCCATACTCGGCCCGAGCGAGCCGCATGATGATCAAAGCTGTGTGGAAGAAGATTATTACAGCAAACTAACACGAAAACGAATAATGAAAAAACTATTTCGTAAactgaaataaaacaattaacaAGGCAAGGTTTGACAAACAAAACTATACTGAAACATATCTTTAACTTACTAAAATAAAAAGACTTGACCAGTTATGGTCTATAAGGTCAACATGGTCAGAGTCACCATGTTTTCAGTGAATACCATGTGGAAGTGAATACCATGTGGAAGTGAATACCATGTGGAAGTTCTATTTGTTGCACTGCGACAATTATGCATATCTAATGTGAACAGTTTAAATAGTTTGACATAACTTAGTCTGGAATGTTGATATTGTATGCGTTTTTCAAATATAATTATCTTTAGAACATTTGTTTAGCACACACTTAGCCCATACTCAATACAGTTCAGACACCCTTGTTTTGCCCTGTAAACATGCTTGAATTCACACATTCAAAGCTCTGTGTTTAAAGTGAAATAAAAAGTTGTACTCATTGCATATTAAATCATTCATGGTTTCTCATCATAGAGTAAATAGGTTGTTGTTCTCCTACCCTAGAAGCCTGGTTTCTAGCTTTGATTGAATCGGGATATTTAGCTTTGTTACACATTGCTACATTAATCCCGGGGCTCACTTGAAAAAGAGATCTCAATGTGACTGATCATGGTTAAATAAAGCATAAAAAGAATGAA

Function

NR:

description
angiopoietin-related protein 5-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036958465.1 True 1120 mRNA 0.44 3 19337875 19348263

Neighbor

gene id symbol gene type direction distance location
LOC110499911 LOC106576376 coding downstream 16992 19310298 ~ 19320883 (-)
mcat LOC106609558 coding downstream 28311 19307345 ~ 19309564 (-)
LOC110501019 LOC106576374 coding downstream 35624 19294271 ~ 19302251 (-)
LOC110501018 LOC106576372 coding downstream 43781 19256160 ~ 19294094 (-)
LOC110499909 LOC106609560 coding downstream 81874 19238118 ~ 19256001 (-)
LOC110499914 LOC106609550 coding upstream 3557 19351820 ~ 19354731 (-)
LOC110499916 LOC106609549 coding upstream 7247 19355510 ~ 19363151 (-)
LOC118942998 LOC106576333 coding upstream 45485 19393748 ~ 19396068 (-)
LOC118942907 NA coding upstream 336991 19684836 ~ 19700486 (-)
LOC110499938 LOC106609532 coding upstream 473988 19822222 ~ 19831727 (-)
G1714447 NA non-coding downstream 8487 19329163 ~ 19329388 (-)
G1714444 NA non-coding downstream 14171 19323477 ~ 19323704 (-)
LOC110501016 LOC106609564 non-coding downstream 161722 19174093 ~ 19221344 (-)
G1714411 NA non-coding downstream 177067 19160231 ~ 19160808 (-)
G1714478 NA non-coding upstream 25598 19373861 ~ 19380347 (-)
G1714479 NA non-coding upstream 36918 19385181 ~ 19413462 (-)
G1714475 NA non-coding upstream 52072 19400335 ~ 19453678 (-)
G1714505 NA non-coding upstream 56726 19404989 ~ 19407829 (-)
G1714494 NA non-coding upstream 60405 19408668 ~ 19409411 (-)
G1713755 NA other downstream 572071 18765460 ~ 18766379 (-)
G1713719 NA other downstream 668550 18668834 ~ 18669325 (-)
G1713637 NA other downstream 732358 18519287 ~ 18605517 (-)
G1713604 NA other downstream 867058 18470513 ~ 18470817 (-)
G1712424 NA other downstream 2042140 17295519 ~ 17295735 (-)
G1714470 NA other upstream 255908 19599461 ~ 19617954 (-)
G1714755 NA other upstream 554522 19902785 ~ 19903457 (-)
G1715085 LOC106609522 other upstream 646408 19994671 ~ 19995602 (-)
G1715091 LOC106576402 other upstream 663047 20011310 ~ 20025695 (-)

Expression


Co-expression Network