LOC110499932


Basic Information

Item Value
gene id LOC110499932
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 19425393 ~ 19431499 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036958467.1
GAGTTTAACACTTCATGACTGAGAGCTGTTCTTCATGACAacagaacccacaacaaccatgactTTTATCACCATATTCATCTGGACACTTGTTTTCTGCTTTCAAGAATCCAGAGGACAGTACGTTGTGACACAGACTCCGGTAGTGAAAGCTATTCTCCCAGGACAGACAGTCTCTCTGAACTGTAAAACCAGCAGTAATGTGTATTCTAATATTCACCTAGCCTGGTACCAACAGAAACCTGGAGGAGCTCCTAAACTCCTTATTTACTATGCTACAACACTTCAGTCTGGGACTCCATCTAGATTCAGTGgcagtggatctgggagtgacttcactctgaccatcagtggagtccaggctgaagatgcaggagattactactgtcagAGTTTACACTGGCTTGGTAGCACTCAGTGGTTCACACAGACCGTAGGACTGGCCTCCTGCTTCTGGTGGGTCCCGTCCACTTTCCAGCTCAAGGTCCAGTCTGAGGGGAAGCCCTTGTTGGCCAGACACGTCAGTGTGGCTGTTGTTGTACTGGACAGCTCCTCACTAGAGGGGGGCAGGACGGAGCTGTTCTTCATGACAacagaacccacaacaaccatgactTTTATCACCATCTTCATCTGGACACTTGCTTTCTACATACAAGAATCCAGAGGACAGTACGTTGTGACACAGACTCCGGTAGTGAAAGCTGTTCTCCCAGAACAGACAGTCTCTCTGAACTGTAAAACCAGCAGTAATGTTTACAACAATAACTTTCTAGCCTGGTACCAACAGAAACCTGGAGGAGCTCCTCAACTCCTTATTTACTATGCTACAGCACTTCAGTCTGGGACTCCATCTAGATTCAGTGgcagtggatctgggagtgacttcactctgaccatcagtggagtccaggctgaagatgcaggagattactactgtcagAGTTTCCACTATCCCAATAGTAAAGATGTGTTCACACAGTGATACAGAGTCGTACAAaaacctccctcagtcagactgcacagtgactgtactgatacagctgggacctactgcaggtgctgagggggaagagacagtGACATGGAACAC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036958467.1 True 1093 mRNA 0.48 5 19425393 19431499

Neighbor

gene id symbol gene type direction distance location
LOC118942905 NA coding upstream 37321 19384992 ~ 19388072 (+)
LOC110499913 NA coding upstream 87742 19331964 ~ 19337651 (+)
bik LOC106609559 coding upstream 119310 19302368 ~ 19306083 (+)
LOC118942896 NA coding upstream 146358 19260745 ~ 19279035 (+)
LOC110501017 LOC106609562 coding upstream 198759 19223437 ~ 19226634 (+)
LOC118942906 NA coding downstream 277715 19709214 ~ 19709762 (+)
LOC110499917 LOC106576387 coding downstream 310625 19742124 ~ 19752304 (+)
LOC110499934 LOC106576387 coding downstream 324410 19755909 ~ 19761293 (+)
LOC110499918 LOC106609536 coding downstream 332163 19763662 ~ 19784185 (+)
LOC110499935 LOC106609535 coding downstream 365980 19797479 ~ 19806872 (+)
G1714097 NA non-coding upstream 19834 19400037 ~ 19405559 (+)
G1714126 LOC106609549 non-coding upstream 64504 19360186 ~ 19360889 (+)
G1714082 NA non-coding upstream 70501 19353880 ~ 19354892 (+)
G1714087 NA non-coding upstream 83974 19340898 ~ 19341419 (+)
G1714074 NA non-coding upstream 103750 19321389 ~ 19321643 (+)
G1714090 NA non-coding downstream 19405 19384972 ~ 19754609 (+)
G1714151 NA non-coding downstream 44397 19475896 ~ 19478051 (+)
G1714154 NA non-coding downstream 56301 19487800 ~ 19533266 (+)
G1714172 NA non-coding downstream 159992 19591491 ~ 19593431 (+)
G1714184 NA non-coding downstream 200448 19631947 ~ 19727761 (+)
G1713384 NA other upstream 687957 18734791 ~ 18737436 (+)
G1713262 NA other upstream 924519 18497147 ~ 18500874 (+)
si:dkey-159a18.1 LOC106609576 other upstream 1157885 18247128 ~ 18268691 (+)
G1712658 NA other upstream 1756807 17666280 ~ 17668586 (+)
LOC110501009 LOC105020375 other upstream 2481604 16914013 ~ 16973778 (+)
nmes1 nmes1 other downstream 677699 20109125 ~ 20113891 (+)
G1715392 NA other downstream 1126923 20558422 ~ 20558751 (+)
LOC110499980 LOC106576426 other downstream 1567099 20954576 ~ 21004439 (+)
G1717161 LOC106576319 other downstream 2744464 22175963 ~ 22180897 (+)
G1717516 NA other downstream 3287420 22718919 ~ 22784445 (+)

Expression


Co-expression Network