Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110500038 |
| gene name | LOC106609436 |
| gene type | misc |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 23014617 ~ 23032420 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| LOW QUALITY PROTEIN: vezatin-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_036957329.1 | False | 4604 | mRNA | 0.53 | 12 | 23014617 | 23032420 |
| XM_036957328.1 | False | 4768 | mRNA | 0.53 | 12 | 23014882 | 23032420 |
| XM_036957331.1 | False | 4756 | mRNA | 0.53 | 12 | 23014882 | 23032420 |
| TU1967841 | True | 563 | TUCP | 0.61 | 5 | 23014806 | 23022764 |
23,014,000
23,016,000
23,018,000
23,020,000
23,022,000
23,024,000
23,026,000
23,028,000
23,030,000
23,032,000
23,034,000
23,034,000
23,036,000
23,038,000
23,040,000
23,042,000
23,044,000
23,046,000
23,048,000
23,050,000
23,052,000
23,054,000
NC_048585.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110501029 | LOC106609386 | coding | upstream | 94258 | 22914831 ~ 22920359 (+) |
| LOC110500034 | LOC106609434 | coding | upstream | 100081 | 22894758 ~ 22914536 (+) |
| LOC110500032 | NA | coding | upstream | 283627 | 22729191 ~ 22730990 (+) |
| LOC110500014 | LOC106576341 | coding | upstream | 297740 | 22713864 ~ 22716877 (+) |
| LOC118943003 | NA | coding | upstream | 677611 | 22326727 ~ 22337006 (+) |
| LOC110500039 | LOC100194705 | coding | downstream | 1305 | 23033725 ~ 23040825 (+) |
| ruxf | LOC105021811 | coding | downstream | 66552 | 23098972 ~ 23100823 (+) |
| amdhd1 | amdhd1 | coding | downstream | 68558 | 23100978 ~ 23105006 (+) |
| klhl42 | LOC106609448 | coding | downstream | 124663 | 23157083 ~ 23160673 (+) |
| LOC110500046 | LOC106609461 | coding | downstream | 131685 | 23164105 ~ 23189656 (+) |
| G1717655 | NA | non-coding | upstream | 29717 | 22983213 ~ 22984900 (+) |
| G1717652 | nduac | non-coding | upstream | 33151 | 22980144 ~ 22981466 (+) |
| G1717653 | NA | non-coding | upstream | 35022 | 22979500 ~ 22979595 (+) |
| G1717650 | NA | non-coding | upstream | 40300 | 22974080 ~ 22974317 (+) |
| G1717649 | NA | non-coding | upstream | 40603 | 22973809 ~ 22974014 (+) |
| G1717688 | NA | non-coding | downstream | 75770 | 23108190 ~ 23108436 (+) |
| G1717689 | NA | non-coding | downstream | 89464 | 23121884 ~ 23131706 (+) |
| G1717720 | NA | non-coding | downstream | 100812 | 23133232 ~ 23134409 (+) |
| G1717725 | LOC106609435 | non-coding | downstream | 114337 | 23146757 ~ 23147769 (+) |
| G1717520 | NA | other | upstream | 134694 | 22820752 ~ 22879923 (+) |
| G1717517 | NA | other | upstream | 163210 | 22849892 ~ 22851407 (+) |
| G1717516 | NA | other | upstream | 230172 | 22718919 ~ 22784445 (+) |
| G1717161 | LOC106576319 | other | upstream | 833720 | 22175963 ~ 22180897 (+) |
| LOC110499980 | LOC106576426 | other | upstream | 2014480 | 20954576 ~ 21004439 (+) |
| G1717785 | NA | other | downstream | 223706 | 23256126 ~ 23256812 (+) |
| G1719225 | NA | other | downstream | 1040985 | 24073405 ~ 24074448 (+) |
| G1719268 | NA | other | downstream | 1103344 | 24135764 ~ 24136323 (+) |
| adm2a | LOC106609361 | other | downstream | 1245411 | 24277797 ~ 24294858 (+) |
