Item | Value |
---|---|
gene id | LOC110501030 |
gene name | LOC106609435 |
gene type | coding |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048585.1 |
NCBI id | CM023239.2 |
chromosome length | 64935962 |
location | 23141591 ~ 23153506 (-) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
description |
---|
PREDICTED: UPF0577 protein KIAA1324-like |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
XM_036957338.1 | False | 3449 | mRNA | 0.55 | 22 | 23141591 | 23153399 |
XM_036957336.1 | False | 3558 | mRNA | 0.54 | 22 | 23141591 | 23153504 |
XM_036957337.1 | True | 3557 | mRNA | 0.54 | 22 | 23141591 | 23153506 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
LOC110500044 | tsn9 | coding | downstream | 3439 | 23133989 ~ 23138152 (-) |
LOC118943006 | amdhd1 | coding | downstream | 30989 | 23108483 ~ 23110665 (-) |
ntn4 | LOC106609442 | coding | downstream | 48980 | 23072015 ~ 23092611 (-) |
LOC110500040 | LOC106576294 | coding | downstream | 87919 | 23041298 ~ 23053672 (-) |
LOC110500037 | LOC106609431 | coding | downstream | 126987 | 22983636 ~ 23014604 (-) |
LOC110501032 | itfg2 | coding | upstream | 26221 | 23179727 ~ 23212378 (-) |
LOC118936407 | itfg2 | coding | upstream | 59561 | 23213067 ~ 23215065 (-) |
trnaa-ugc-147 | NA | coding | upstream | 98253 | 23251759 ~ 23251832 (-) |
LOC118942912 | NA | coding | upstream | 110979 | 23264485 ~ 23269610 (-) |
nup37 | nup37 | coding | upstream | 176080 | 23329586 ~ 23340572 (-) |
G1718386 | NA | non-coding | downstream | 14094 | 23123414 ~ 23127497 (-) |
G1718381 | amdhd1 | non-coding | downstream | 37566 | 23102613 ~ 23104025 (-) |
G1718415 | LOC106576293 | non-coding | downstream | 40789 | 23099015 ~ 23100802 (-) |
G1718399 | NA | non-coding | downstream | 75673 | 23065650 ~ 23065918 (-) |
G1718421 | LOC106609448 | non-coding | upstream | 3626 | 23157132 ~ 23158330 (-) |
G1718385 | NA | non-coding | upstream | 5733 | 23159239 ~ 23159905 (-) |
G1718458 | NA | non-coding | upstream | 101118 | 23254624 ~ 23254869 (-) |
G1718479 | NA | non-coding | upstream | 103380 | 23256886 ~ 23257214 (-) |
G1718478 | NA | non-coding | upstream | 105226 | 23258732 ~ 23259044 (-) |
G1718397 | NA | other | downstream | 83772 | 23057381 ~ 23057819 (-) |
G1718181 | NA | other | downstream | 175714 | 22882496 ~ 22965877 (-) |
igf1 | LOC100136517 | other | upstream | 212594 | 23366099 ~ 23386794 (-) |
G1718586 | NA | other | upstream | 328544 | 23482050 ~ 23483029 (-) |
G1718710 | NA | other | upstream | 419814 | 23573320 ~ 23574041 (-) |
LOC110500069 | LOC106609440 | other | upstream | 421420 | 23574474 ~ 23586547 (-) |
G1718713 | NA | other | upstream | 429069 | 23582575 ~ 23582850 (-) |