Gene
RNA
| Item | Value |
|---|---|
| gene id | igf1 |
| gene name | LOC100136517 |
| gene type | misc |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 23366099 ~ 23386794 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| insulin-like growth factor I isoform X2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_021577177.2 | False | 4204 | mRNA | 0.42 | 4 | 23366099 | 23386771 |
| XM_021577178.2 | False | 4138 | mRNA | 0.41 | 4 | 23366099 | 23386786 |
| XM_021577176.2 | False | 4263 | mRNA | 0.42 | 5 | 23366099 | 23386794 |
| TU1968794 | False | 4020 | TUCP | 0.41 | 4 | 23366100 | 23386669 |
| TU1968795 | True | 8113 | TUCP | 0.42 | 3 | 23366100 | 23386669 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110500053 | LOC106609478 | coding | downstream | 10998 | 23352595 ~ 23355101 (-) |
| nup37 | nup37 | coding | downstream | 25527 | 23329586 ~ 23340572 (-) |
| LOC118942912 | NA | coding | downstream | 96489 | 23264485 ~ 23269610 (-) |
| trnaa-ugc-147 | NA | coding | downstream | 114267 | 23251759 ~ 23251832 (-) |
| LOC118936407 | itfg2 | coding | downstream | 151034 | 23213067 ~ 23215065 (-) |
| LOC110500055 | dram1 | coding | upstream | 11072 | 23397866 ~ 23403408 (-) |
| LOC110500057 | LOC106609452 | coding | upstream | 36945 | 23423739 ~ 23437795 (-) |
| LOC110500059 | mybpc1 | coding | upstream | 51225 | 23438019 ~ 23475294 (-) |
| LOC110500061 | spic | coding | upstream | 97427 | 23484221 ~ 23486168 (-) |
| LOC110500062 | LOC106576270 | coding | upstream | 104033 | 23490827 ~ 23497999 (-) |
| G1718500 | NA | non-coding | downstream | 18598 | 23313001 ~ 23347501 (-) |
| G1718499 | NA | non-coding | downstream | 53774 | 23311156 ~ 23312325 (-) |
| G1718482 | NA | non-coding | downstream | 102841 | 23262715 ~ 23263258 (-) |
| G1718481 | NA | non-coding | downstream | 104145 | 23261673 ~ 23261954 (-) |
| G1718477 | NA | non-coding | downstream | 106128 | 23259382 ~ 23259971 (-) |
| G1718567 | NA | non-coding | upstream | 54864 | 23441658 ~ 23442256 (-) |
| G1718641 | NA | non-coding | upstream | 101378 | 23488172 ~ 23488933 (-) |
| G1718642 | NA | non-coding | upstream | 102464 | 23489258 ~ 23489476 (-) |
| G1718643 | NA | non-coding | upstream | 102795 | 23489589 ~ 23489801 (-) |
| G1718645 | NA | non-coding | upstream | 103236 | 23490030 ~ 23490313 (-) |
| ntn4 | LOC106609442 | other | downstream | 293142 | 23072015 ~ 23092611 (-) |
| G1718397 | NA | other | downstream | 308280 | 23057381 ~ 23057819 (-) |
| LOC110500040 | LOC106576294 | other | downstream | 312511 | 23041298 ~ 23053672 (-) |
| G1718181 | NA | other | downstream | 400222 | 22882496 ~ 22965877 (-) |
| G1718586 | NA | other | upstream | 95256 | 23482050 ~ 23483029 (-) |
| G1718710 | NA | other | upstream | 186526 | 23573320 ~ 23574041 (-) |
| LOC110500069 | LOC106609440 | other | upstream | 188132 | 23574474 ~ 23586547 (-) |
| G1718713 | NA | other | upstream | 195781 | 23582575 ~ 23582850 (-) |
| LOC110500089 | LOC106609371 | other | upstream | 655039 | 24037871 ~ 24043628 (-) |
| LOC110500035 | LOC106609443 | other | downstream | 413817 | 22929761 ~ 22973628 (-) |
| species | gene id | symbol | gene type | chromosome | NCBI id | location |
|---|---|---|---|---|---|---|
| grasscarp (Ctenopharyngodon idella) | G110967 | NA | non-coding | CI01000020 | null | 1715495 ~ 1725122 (+) |
| rainbow trout (Oncorhynchus mykiss) | LOC110506570 | NA | misc | NC_048566.1 | CM023220.2 | 7809836 ~ 7815086 (-) |
