LOC110500073 (LOC106609463)


Basic Information

Item Value
gene id LOC110500073
gene name LOC106609463
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 23641390 ~ 23644750 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021577219.2
CCTTCCGCCGAGAGAAAGACCCACATCTGCGAATGCTGCGTAGGCTAAAGGATGTGAGCAGGAGTGGCACTTGGGTCCCTTTAAATAGAGCCGTCCTTAAACTTTGGACAATCAGATCAGCTGAAGTTTGCAAACAGCTTGCTGTAGAACTCAAAGCTACATCCGAAATCTCTGGGATACATTTTCTGTGTTTTGGGGGTAAAAGATGGAAATAACCAAGACATCTGGGATGAGGAACGCCGTTCTTGTGCTCTTACTGGCTGTTCTTCAGGGATTTCGACAAGTAGACGCTCTTCCAAACCCATCACCTCTCCTGGGATCCAACTGGGGGAATCCGAGAAGATACGTACACCTGCAGACGTCTTCAGACGTGAACAATTTCTACCTTGAGATCAGTTTAAATGGCCACGTGAGCAAAACTACACTTCGAAGCTCATACAGTGTGATGTTATTGAAGGCGGAAACAAGAGAGCGCGTGGCGATACTTGGAGTCAAAAGTAACCGCTACCTGTGCATGGATGCCCTGGGAAACCCTTTCAGCTCTACTGTTTGCCTCAAGGAAGACTGCCTTTTTAACCACAAGCTGTTAGAAAACCACCGCAACGTGTACTACTCTTGTAGAACTGGTATTCTGCTCAACTTGGAAGGGATAAAGCAAGTGTACACAGTGGGTCAGAATCTACCGCAAACCTCCCTCTTCCTGTCGGAGAAGAACACCGTGCCGCTGGAGCGCCTCTTGCATCGGGAGAAGAGGAACCGGGCGGTTGACCCTTCTGACCCGTACAACATGCTGGGTCAAACGGAGGAGGACTCCCGGGCAATGCCGCAACTGGATGACACCTTGGAGGTGGACCAGGAGGCTGAACTCCCCGAGGGACGCAACATCTCCCGGGAGACCCCTCAGTCTCCCTCCGACGACCCGTGGAACGTGCATTCCCTAAACCCCCCTCCCAGCCCCCGTATCATGAATGGAATGATGGGATAAGAGGACAGGACACTCGCAGTTGTACACTTGGGTTTATCAATGTAAGCTATGTATGCGTTCACGTTGGGTCTTTTCCAGCAGTTCTGCAAACAACCCTCAAAGTTTTAAACAGATGTTATACTTGTGAAAGTCTGACAGTGACACCCTTATTAGGGCATATTGGTAATTTATATGTAGTCATAATATGAAATATGTAGCTAAAAAAATACCACATTGGAACATTTTATTTCGGCCATTCTTTACTATAGCACAGTGAGTAACTATTGGTTTCCGTGATTTTTAATTCCAGGACGCAAATTCTGTATTCTGTATTTGATTGCGCTCTGTTTACGGGGAGGATTCTTATGAGAATCATGCTGAAATCCGAAATAATTGTGCGTcttttttggagaaaaaaaaagaagagttGAGCTGAAGTCACTTTATTAAATGTTATATAATGCAAGAATACTGCAAGAAAATACCATTGATATGAAACTTAAACATATTCCATCTAAAATGAGCCCTACTATAATGTTGAATATGCCAGTAGGCATGCATGTTATAATGCATGTTCTTCAAGTGAGACGTTTAATTTTAAACGGAAATGAATGGTCCACTCTACTGGGTATCAGAACGAATAGAAAccacatgttataaatgctggccACCAAAAGCAAGCAACAAAGCCAATTCCATTAAAGTTTTaagaatttatttatttaaatccaTTCATTTATTGTTATTTATAGTATACTATTTATATGGATGCTTAGCTGTTAAAGAGTTATTTTGAAAACCTGTAAGTTATGAGGAGACTGTGTGTGAGGGCTAGTGACATTTATCATgaattttttttattatgttgaTGAAGAAAATATGACTTTTTCCAATTAATTAATTTATATTATTTTAGATCAATATTTTAGAACTTCAGGATGAAGAACTGTATACTCACAACCACTTCATCCTAGAATTCTATGTATGATGCAATCATATAAGTACAGGCTAAATGTGTGAGGAAGCTCTGTGTCACATTAAGTGCGTAAGCAGGTTGACCATTGACTCATTCACTTTGAGCTTCCAGTCATTAAGGTTGCGTGTCCCACGCTTCCGCATCTCATTATGGAGAAAATTGGCATAtcttagttcctgccaaaccatcttctaaaaataaacatttccacattctatttttgtttcaatcTCACTAAGTAACATGTTGGAGGTGTTTTAGTCAAAGGAACACATGACGGTGACCACTAACCTTTGTCCTGTTTCACTTTGAGGTTAAACCACATTGACCTGGCTGTCACATCTGAGAGGAGCCTTAACAATCTCAGTGGCGGTCATGAGTGAAGGCACTTTTTTGGGGATTGATATACTGCAGATATTTGTCAATATTTTTGAGGCAGTTTATTCAAATATGGCAATATTCCTTCAAAGGAAGAACTGTAATAACACTTAAGTTGAATACGATTTAAGCAAACCCACCCATTCATGTTGAAGGATCAGATTTAGTACAGATGTTTATGCTGCCACTTGGGCCTTTGGAGCATTACTCATGGTTGTCTCTGGAACAATCTAGACACAGGTCAGTAGCTGTCGCATAATTTTCAATTGCCCCAGTTCTTTTGACCTGTCACGCTCAgcctgaacactgaaacaaagtGAATTATTTCATGTTTTAAACATGAGAAAGTTCGCAACTCGGAAGTGGCCCCTCAGGTGATTAAACCTGATATTTCCCAACCTGCAAACATCCACTGGTTCCAATCCTGCTTTGCATAAAGAAACTACAAGACTTGCACACTCTATTGCCTCTTATGCAACCTTTAGTGACAATTACATTTGTGCAAGATCAGAGGAAGCTTGTCACCATTTATGAACACTTGAGATACATGGCCATTGAACATGTTAAACACCAATATTGAAGCCTTTTATTGGCAATACAATACCAAACAATACTGTAACGATGTACTGCTTGCATATGAAAATGACAATGTGTAACAATAAAGACAAAACACTGTCAATG

Function

NR:

description
fibroblast growth factor 23-like

GO: NA

KEGG:

id description
K22428 FGF23; fibroblast growth factor 23

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021577219.2 True 2999 mRNA 0.41 3 23641390 23644750

Neighbor

gene id symbol gene type direction distance location
LOC110500071 LOC106609473 coding upstream 18984 23614138 ~ 23622406 (+)
ada2b LOC106609445 coding upstream 130832 23505048 ~ 23510558 (+)
LOC110500067 LOC106609471 coding upstream 136579 23501124 ~ 23504811 (+)
LOC110500058 LOC106576272 coding upstream 217652 23405462 ~ 23423738 (+)
LOC110500056 ccd53 coding upstream 243654 23393527 ~ 23397736 (+)
LOC118942913 NA coding downstream 63712 23708462 ~ 23709161 (+)
LOC110500077 etv6 coding downstream 65519 23710269 ~ 23732052 (+)
LOC110500079 LOC106576259 coding downstream 88260 23733010 ~ 23791315 (+)
LOC118943007 NA coding downstream 252218 23896968 ~ 23903687 (+)
LOC110500082 LOC106609433 coding downstream 265255 23910005 ~ 23936559 (+)
G1718742 NA non-coding upstream 8292 23632899 ~ 23633098 (+)
G1718739 NA non-coding upstream 13319 23627841 ~ 23628071 (+)
G1718734 NA non-coding upstream 28552 23612564 ~ 23612838 (+)
G1718704 NA non-coding upstream 43147 23597984 ~ 23598243 (+)
G1718914 NA non-coding downstream 164461 23809211 ~ 23809507 (+)
G1718963 NA non-coding downstream 199208 23843958 ~ 23844275 (+)
G1718964 NA non-coding downstream 199661 23844411 ~ 23844769 (+)
G1717785 NA other upstream 384578 23256126 ~ 23256812 (+)
ruxf LOC105021811 other upstream 540581 23098972 ~ 23100823 (+)
LOC110500038 LOC106609436 other upstream 618626 23014617 ~ 23032420 (+)
G1717520 NA other upstream 761467 22820752 ~ 22879923 (+)
G1719225 NA other downstream 428655 24073405 ~ 24074448 (+)
G1719268 NA other downstream 491014 24135764 ~ 24136323 (+)
adm2a LOC106609361 other downstream 633081 24277797 ~ 24294858 (+)
LOC110500097 LOC106576231 other downstream 671888 24315919 ~ 24321712 (+)
G1720836 NA other downstream 1967066 25611816 ~ 25612268 (+)

Expression


Co-expression Network