Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC118942913 |
| gene name | NA |
| gene type | misc |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 23708462 ~ 23709161 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_005038558.1 | False | 358 | mRNA | 0.42 | 2 | 23708462 | 23709161 |
| TU1969176 | True | 339 | lncRNA | 0.42 | 2 | 23708468 | 23709148 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110500073 | LOC106609463 | coding | upstream | 63712 | 23641390 ~ 23644750 (+) |
| LOC110500071 | LOC106609473 | coding | upstream | 86056 | 23614138 ~ 23622406 (+) |
| ada2b | LOC106609445 | coding | upstream | 197904 | 23505048 ~ 23510558 (+) |
| LOC110500067 | LOC106609471 | coding | upstream | 203651 | 23501124 ~ 23504811 (+) |
| LOC110500058 | LOC106576272 | coding | upstream | 284724 | 23405462 ~ 23423738 (+) |
| LOC110500077 | etv6 | coding | downstream | 1108 | 23710269 ~ 23732052 (+) |
| LOC110500079 | LOC106576259 | coding | downstream | 23849 | 23733010 ~ 23791315 (+) |
| LOC118943007 | NA | coding | downstream | 187807 | 23896968 ~ 23903687 (+) |
| LOC110500082 | LOC106609433 | coding | downstream | 200844 | 23910005 ~ 23936559 (+) |
| rpap3 | LOC106609438 | coding | downstream | 267512 | 23976673 ~ 23985903 (+) |
| G1718742 | NA | non-coding | upstream | 75364 | 23632899 ~ 23633098 (+) |
| G1718739 | NA | non-coding | upstream | 80391 | 23627841 ~ 23628071 (+) |
| G1718734 | NA | non-coding | upstream | 95624 | 23612564 ~ 23612838 (+) |
| G1718704 | NA | non-coding | upstream | 110219 | 23597984 ~ 23598243 (+) |
| G1718914 | NA | non-coding | downstream | 100050 | 23809211 ~ 23809507 (+) |
| G1718963 | NA | non-coding | downstream | 134797 | 23843958 ~ 23844275 (+) |
| G1718964 | NA | non-coding | downstream | 135250 | 23844411 ~ 23844769 (+) |
| G1718965 | NA | non-coding | downstream | 135650 | 23844811 ~ 23845088 (+) |
| G1717785 | NA | other | upstream | 451650 | 23256126 ~ 23256812 (+) |
| ruxf | LOC105021811 | other | upstream | 607653 | 23098972 ~ 23100823 (+) |
| LOC110500038 | LOC106609436 | other | upstream | 685698 | 23014617 ~ 23032420 (+) |
| G1717520 | NA | other | upstream | 828539 | 22820752 ~ 22879923 (+) |
| G1719225 | NA | other | downstream | 364244 | 24073405 ~ 24074448 (+) |
| G1719268 | NA | other | downstream | 426603 | 24135764 ~ 24136323 (+) |
| adm2a | LOC106609361 | other | downstream | 568670 | 24277797 ~ 24294858 (+) |
| LOC110500097 | LOC106576231 | other | downstream | 607477 | 24315919 ~ 24321712 (+) |
| G1720836 | NA | other | downstream | 1902655 | 25611816 ~ 25612268 (+) |
