LOC110500102 (ankrd16)


Basic Information

Item Value
gene id LOC110500102
gene name ankrd16
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 24383441 ~ 24384781 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021577269.2
TGATGGCCTGCACCCGGAGGAACCTGGGTATGATCCAGGAACTACTGTCCCATGAGGCTGCCCATATGCTGAAGAACAAGGACGGCTGGAACTCCTTCCACATCGCCTGCAGGAAGGGAGACCCAGCGGTcatacagcacctcctactggccAACCCGGAAGTCTGGAGGACAGAGAGTAAAACGCTGAGGACTCCTCTGCACACTGCAGCAATGCACGGCTGTGAAGAAGTGGTCAGCATCTTGGTACAGAGGTGTGGTTATGTTCCGGATGGCAGGGACAGCTGTGGGGTCACTCTCTTTATGGACGCAGTGAGGAACGGACACATATTTGTTGCCAAACTACTGCTGGAGAAGCATCAGGCCTCTCCGACTGCAGCAGACATCCCGGGGGCCCAGTCGGTGCACCATGTTGCTGTCACAGCCCAAGAGGAGGCGCTAGAGTTCCTAGTGAGGGATCTCGGAGTGGACGTGAACCAGACAGCCACTGACATGCAGCTCACATCCCTGCACTACGCTGCCAAGGAGGGCCACACAGGCACAATCAAAGCACTCCTCACATTAGGAGCAGGTACTGAACAGGTACTGTAGAgaagtggttcccaaactgtggggtgAGGGGTCGGCAGGCatgctcccccccaaaaaacagacatgctccccccccaaaaaagtatattattattatttttaaacatttttaa

Function

symbol description
ankrd16 Orthologous to human ANKRD16 (ankyrin repeat domain 16).

NR:

description
ankyrin repeat domain-containing protein 16-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021577269.2 True 703 mRNA 0.54 5 24383441 24384781

Neighbor

gene id symbol gene type direction distance location
trnay-gua-64 NA coding upstream 206 24383148 ~ 24383235 (+)
trnay-gua-63 NA coding upstream 817 24382537 ~ 24382624 (+)
LOC110500099 LOC106609356 coding upstream 8478 24366827 ~ 24374963 (+)
LOC110500097 LOC106576231 coding upstream 61729 24315919 ~ 24321712 (+)
adm2a LOC106609361 coding upstream 88583 24277797 ~ 24294858 (+)
LOC110500103 LOC106609353 coding downstream 4531 24389312 ~ 24401010 (+)
asb13a.1 LOC106609354 coding downstream 16377 24401158 ~ 24405538 (+)
asb13a.2 LOC106609355 coding downstream 20838 24405619 ~ 24414681 (+)
mkln1 LOC106609349 coding downstream 191027 24575808 ~ 24603395 (+)
LOC110500922 LOC106576224 coding downstream 249896 24634677 ~ 24637555 (+)
G1719514 NA non-coding upstream 17375 24365833 ~ 24366066 (+)
G1719512 LOC106576230 non-coding upstream 20979 24362118 ~ 24362462 (+)
G1719511 NA non-coding upstream 21551 24361643 ~ 24361890 (+)
G1719508 NA non-coding upstream 31891 24351194 ~ 24351550 (+)
G1719507 NA non-coding upstream 32434 24350695 ~ 24351007 (+)
G1719529 NA non-coding downstream 18280 24403061 ~ 24403271 (+)
G1719520 NA non-coding downstream 23481 24408262 ~ 24408830 (+)
G1719524 NA non-coding downstream 26729 24411510 ~ 24412412 (+)
G1719596 NA non-coding downstream 33230 24418011 ~ 24418237 (+)
G1719268 NA other upstream 247118 24135764 ~ 24136323 (+)
G1719225 NA other upstream 308993 24073405 ~ 24074448 (+)
G1717785 NA other upstream 1126629 23256126 ~ 23256812 (+)
G1720836 NA other downstream 1227035 25611816 ~ 25612268 (+)
G1720853 NA other downstream 1251554 25636335 ~ 25636589 (+)
G1721084 pfkfb3 other downstream 1653521 26038302 ~ 26041843 (+)
cep83 LOC106609290 other downstream 1944993 26324744 ~ 26333964 (+)
G1722079 NA other downstream 2436866 26821647 ~ 26821935 (+)

Expression


Co-expression Network