asb13a.1 (LOC106609354)


Basic Information

Item Value
gene id asb13a.1
gene name LOC106609354
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 24401158 ~ 24405538 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021577272.2
ATTTATGAACTTTGCACTGAAGCGGACCATTTGTGTTATTCATTGATGCAAGACTAAAAACAGACAACAGTCTGATTCGTTTGACAAAGACCATCCTTTAATGAAATGCAAAAATTACTCTGGATTTGCTGAATTCCTGTGTTGGCTGGTTGGTATTAATATGGCAACCTATTTGTAACCGTTAGTGTAATGGTAAAATGCACTGTTAACATGGCATGTCTACAAAATCAAAAAGCTCTTATAACATGGTGAGCAAATACGTACTTAAGTCCTAAGTCATCCTCACGCTTAGAACTCCAACTCCCAGAAGTCTCTGCTGCTTCTCTCATAACAAATATCGTCACATGGACACTGTTTCAACAAAAATAAACCTAGTGCACTCATGTTGATTTTGTTTATATGTCACGCTAATATTTCCCAATGGAAAATCCTGCAATAATGGAAATGACAGCGGCACGGCGTTCGAACTTTGGAGATATTGGGTTTTGGGCAGACCGAACCGCGTTGCATGAGGCCGCGTCCTTAGGCAGGGCCCTTCAAGTGAAACAGCTGATTGAGGGTGGAGCATCTGTAAACATGGTGACAGTAGACAATATCACCCCGCTCCATGATGCCTGCATCCAGGGACATCCAAACTGTGTTCGACTGCTACTAGATGCAGGGGCTCAGGTGGACGTGAGGACCATCCATGGCAGCACTCCTCTCTGTAACGCCTGTGCTGCGGGGAGCCTGGAGTGTGCAAAGATGCTGCTGGAACATGGAGCCAAAGTCAACCCCTCCCTCACAGCACTCACTGCCTCTCCTCTGCATGAGGCCTGCATAAAGGGTAATGCAGATATAGCGAGGCTAATGATAGCGCATGGAGCCTTGCTAGAGGCCTTTGATCTCCAGTTCGGTACCCCGCTACATGCTGCCTGTGCCAAGGAACATGTGGACTGTGCCAGGGTGCTGCTCAAAGCAGGTGCCAAGGTGAATGCAGCTAAGTTCCATGAGACGGCTCTCCACCATGCTGCCAGAGTAGAGATGGTGGACATGATTGAGTTACTGGTGGACTTTGGCGGCAACGTGTATGTCACAGACAACGACAACAAAAAGCCCATAGACTACACCAAGCCTGGCTCTCCCACTGAACAATGCTTACAGTATTATGAAAGTACTCCTCTGAGTCTGCAGCAACTTAGCAGAGTGACGCTGAGGACGTTGCTGGGTACCAGAGCTCTGGAGGTAGTAGGTCAACTGGACATATCTCAACGTACCATCAGCTACATTCTCTGTGAGGGGTGTTGATGCTGCCTTATGAACTGACTCGTGGATGGATTCCCAAAGGAATATCAGAAAAAGGAGAATGCTTGAATACTAAGCTAGGACACATCTCATCATCTTCATATGGTTTGTTTACTGTGGGACACACATACAAATTGATGTGATTTATTACTGTGTTATAAGCGGTAACACATTGTAAAATACATTTCAAGAAGGCCTGCTGCAATTGTTCTATTCTATAGAGATGAAAGCTTGTTTTAGCATGGTTAGGGAAAATAAAGCCAAACAATGTCA

Function

NR:

description
ankyrin repeat and SOCS box protein 13-like

GO:

id name namespace
GO:0035556 intracellular signal transduction biological_process
GO:0016567 protein ubiquitination biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021577272.2 True 1557 mRNA 0.46 6 24401158 24405538

Neighbor

gene id symbol gene type direction distance location
LOC110500103 LOC106609353 coding upstream 148 24389312 ~ 24401010 (+)
LOC110500102 ankrd16 coding upstream 16377 24383441 ~ 24384781 (+)
trnay-gua-64 NA coding upstream 17923 24383148 ~ 24383235 (+)
trnay-gua-63 NA coding upstream 18534 24382537 ~ 24382624 (+)
LOC110500099 LOC106609356 coding upstream 26195 24366827 ~ 24374963 (+)
asb13a.2 LOC106609355 coding downstream 81 24405619 ~ 24414681 (+)
mkln1 LOC106609349 coding downstream 170270 24575808 ~ 24603395 (+)
LOC110500922 LOC106576224 coding downstream 229139 24634677 ~ 24637555 (+)
LOC110501038 NA coding downstream 247689 24653227 ~ 24657324 (+)
LOC110500114 LOC106576221 coding downstream 254289 24659827 ~ 24744884 (+)
G1719514 NA non-coding upstream 35092 24365833 ~ 24366066 (+)
G1719512 LOC106576230 non-coding upstream 38696 24362118 ~ 24362462 (+)
G1719511 NA non-coding upstream 39268 24361643 ~ 24361890 (+)
G1719508 NA non-coding upstream 49608 24351194 ~ 24351550 (+)
G1719507 NA non-coding upstream 50151 24350695 ~ 24351007 (+)
G1719520 NA non-coding downstream 2724 24408262 ~ 24408830 (+)
G1719524 NA non-coding downstream 5972 24411510 ~ 24412412 (+)
G1719596 NA non-coding downstream 12473 24418011 ~ 24418237 (+)
G1719612 NA non-coding downstream 27506 24433044 ~ 24433314 (+)
LOC110500097 LOC106576231 other upstream 83620 24315919 ~ 24321712 (+)
adm2a LOC106609361 other upstream 106361 24277797 ~ 24294858 (+)
G1719268 NA other upstream 264835 24135764 ~ 24136323 (+)
G1719225 NA other upstream 326710 24073405 ~ 24074448 (+)
G1717785 NA other upstream 1144346 23256126 ~ 23256812 (+)
G1720836 NA other downstream 1206278 25611816 ~ 25612268 (+)
G1720853 NA other downstream 1230797 25636335 ~ 25636589 (+)
G1721084 pfkfb3 other downstream 1632764 26038302 ~ 26041843 (+)
cep83 LOC106609290 other downstream 1924236 26324744 ~ 26333964 (+)
G1722079 NA other downstream 2416109 26821647 ~ 26821935 (+)

Expression


Co-expression Network