Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110500922 |
| gene name | LOC106576224 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 24634677 ~ 24637555 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product, partial |
| id | name | namespace |
|---|---|---|
| GO:0019556 | histidine catabolic process to glutamate and formamide | biological_process |
| GO:0019557 | histidine catabolic process to glutamate and formate | biological_process |
| GO:0009058 | biosynthetic process | biological_process |
| GO:0005737 | cytoplasm | cellular_component |
| GO:0004397 | histidine ammonia-lyase activity | molecular_function |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| LOC110500922 | True | 1164 | mRNA | 0.58 | 11 | 24634677 | 24637555 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| mkln1 | LOC106609349 | coding | upstream | 31282 | 24575808 ~ 24603395 (+) |
| asb13a.2 | LOC106609355 | coding | upstream | 220498 | 24405619 ~ 24414681 (+) |
| asb13a.1 | LOC106609354 | coding | upstream | 229139 | 24401158 ~ 24405538 (+) |
| LOC110500103 | LOC106609353 | coding | upstream | 233667 | 24389312 ~ 24401010 (+) |
| LOC110500102 | ankrd16 | coding | upstream | 249896 | 24383441 ~ 24384781 (+) |
| LOC110501038 | NA | coding | downstream | 15672 | 24653227 ~ 24657324 (+) |
| LOC110500114 | LOC106576221 | coding | downstream | 22272 | 24659827 ~ 24744884 (+) |
| LOC110500113 | LOC106609343 | coding | downstream | 83413 | 24720968 ~ 24723685 (+) |
| LOC110500118 | LOC106609342 | coding | downstream | 149925 | 24787480 ~ 24791567 (+) |
| LOC110500123 | NA | coding | downstream | 1131331 | 25768886 ~ 25772881 (+) |
| G1719695 | NA | non-coding | upstream | 40287 | 24530156 ~ 24594390 (+) |
| G1719705 | NA | non-coding | upstream | 69337 | 24564257 ~ 24565340 (+) |
| G1719657 | NA | non-coding | upstream | 139153 | 24495298 ~ 24495524 (+) |
| G1719647 | LOC106609352 | non-coding | upstream | 148382 | 24485663 ~ 24486295 (+) |
| G1719644 | NA | non-coding | upstream | 161318 | 24473049 ~ 24473359 (+) |
| G1719795 | NA | non-coding | downstream | 72360 | 24709915 ~ 24717545 (+) |
| G1719811 | NA | non-coding | downstream | 117786 | 24755341 ~ 24756316 (+) |
| G1719862 | NA | non-coding | downstream | 194845 | 24832400 ~ 24833158 (+) |
| G1719826 | NA | non-coding | downstream | 237984 | 24875539 ~ 24935910 (+) |
| LOC110500097 | LOC106576231 | other | upstream | 317139 | 24315919 ~ 24321712 (+) |
| adm2a | LOC106609361 | other | upstream | 339880 | 24277797 ~ 24294858 (+) |
| G1719268 | NA | other | upstream | 498354 | 24135764 ~ 24136323 (+) |
| G1719225 | NA | other | upstream | 560229 | 24073405 ~ 24074448 (+) |
| G1717785 | NA | other | upstream | 1377865 | 23256126 ~ 23256812 (+) |
| G1720836 | NA | other | downstream | 974261 | 25611816 ~ 25612268 (+) |
| G1720853 | NA | other | downstream | 998780 | 25636335 ~ 25636589 (+) |
| G1721084 | pfkfb3 | other | downstream | 1400747 | 26038302 ~ 26041843 (+) |
| cep83 | LOC106609290 | other | downstream | 1692219 | 26324744 ~ 26333964 (+) |
| G1722079 | NA | other | downstream | 2184092 | 26821647 ~ 26821935 (+) |
